RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 PCBP4P57723 403 aaKnown RBP17.83■□□□□ 0.44
PTPRK-218ENST00000525459 CHI3L2Q15782 390 aa17.83■□□□□ 0.44
PTPRK-218ENST00000525459 HKDC1Q2TB90 917 aa17.83■□□□□ 0.44
PTPRK-218ENST00000525459 PRMT9Q6P2P2 845 aa17.83■□□□□ 0.44
PTPRK-218ENST00000525459 ABHD13Q7L211 337 aa17.83■□□□□ 0.44
PTPRK-218ENST00000525459 SYVN1Q86TM6 617 aa17.83■□□□□ 0.44
PTPRK-218ENST00000525459 ESX1Q8N693 406 aa17.83■□□□□ 0.44
PTPRK-218ENST00000525459 SRFBP1Q8NEF9 429 aaKnown RBP17.83■□□□□ 0.44
PTPRK-218ENST00000525459 WDR20Q8TBZ3 569 aa17.83■□□□□ 0.44
PTPRK-218ENST00000525459 MGARPQ8TDB4 240 aa17.83■□□□□ 0.44
PTPRK-218ENST00000525459 CREB3L4Q8TEY5 395 aa17.83■□□□□ 0.44
PTPRK-218ENST00000525459 GATA6Q92908 595 aa17.83■□□□□ 0.44
PTPRK-218ENST00000525459 C17orf62Q9BQA9 187 aa17.83■□□□□ 0.44
PTPRK-218ENST00000525459 SLC6A16Q9GZN6 736 aa17.83■□□□□ 0.44
PTPRK-218ENST00000525459 CDC14AQ9UNH5 594 aa17.83■□□□□ 0.44
PTPRK-218ENST00000525459 SEC16AO15027 2179 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 FOXE1O00358 373 aaPredicted RBP17.82■□□□□ 0.44
PTPRK-218ENST00000525459 P2RX6O15547 441 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 CRCPO75575 148 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 SERPIND1P05546 499 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 LIPCP11150 499 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 ARFIP1P53367 373 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 TGM3Q08188 693 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 HERC3Q15034 1050 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 ATG16L1Q676U5 607 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 TMEM214Q6NUQ4 689 aaKnown RBP17.82■□□□□ 0.44
PTPRK-218ENST00000525459 ZCCHC23Q6ZST2 131 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 ZNF473Q8WTR7 871 aaKnown RBP17.82■□□□□ 0.44
PTPRK-218ENST00000525459 CCT6BQ92526 530 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 CMTM7Q96FZ5 175 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 SPRY4Q9C004 299 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 CCDC86Q9H6F5 360 aaKnown RBP17.82■□□□□ 0.44
PTPRK-218ENST00000525459 SYNPO2LQ9H987 977 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 MLXIPLQ9NP71 852 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 ZNF225Q9UK10 706 aa17.82■□□□□ 0.44
PTPRK-218ENST00000525459 A0A088AWK7 358 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 WDR91A4D1P6 747 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 PPP6CO00743 305 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 CAPN1P07384 714 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 PIM1P11309 404 aaPredicted RBP17.81■□□□□ 0.44
PTPRK-218ENST00000525459 HSD3B1P14060 373 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 ZNF10P21506 573 aaPredicted RBP17.81■□□□□ 0.44
PTPRK-218ENST00000525459 HSD3B2P26439 372 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 CYP4F2P78329 520 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 ADPRMQ3LIE5 342 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 TMEM35AQ53FP2 167 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 CHSY3Q70JA7 882 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 NLGN4XQ8N0W4 816 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 ARHGEF39Q8N4T4 335 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 CDYL2Q8N8U2 506 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 NLGN4YQ8NFZ3 816 aaPredicted RBP17.81■□□□□ 0.44
PTPRK-218ENST00000525459 HUS1BQ8NHY5 278 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 METTL6Q8TCB7 284 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 GAL3ST3Q96A11 431 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 C10orf90Q96M02 699 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 BRF2Q9HAW0 419 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 PRM3Q9NNZ6 103 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 NCOR2Q9Y618 2525 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 UBFD1O14562 309 aaKnown RBP17.81■□□□□ 0.44
PTPRK-218ENST00000525459 CHEK2O96017 543 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 CCNYL3P0C7X3 344 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 UROSP10746 265 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 AGXTP21549 392 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 RORAP35398 523 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 ATP1A2P50993 1020 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 ABHD18Q0P651 414 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 ARL13AQ5H913 290 aaPredicted RBP17.81■□□□□ 0.44
PTPRK-218ENST00000525459 C6orf15Q6UXA7 325 aaPredicted RBP17.81■□□□□ 0.44
PTPRK-218ENST00000525459 TTLL10Q6ZVT0 673 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 CUZD1Q86UP6 607 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 DSELQ8IZU8 1212 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 SNIP1Q8TAD8 396 aaKnown RBP17.81■□□□□ 0.44
PTPRK-218ENST00000525459 FGF11Q92914 225 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 MOCOSQ96EN8 888 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 MS4A8Q9BY19 250 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 DMRT3Q9NQL9 472 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 ACSS2Q9NR19 701 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 STARD5Q9NSY2 213 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 INTS9Q9NV88 658 aaKnown RBP17.81■□□□□ 0.44
PTPRK-218ENST00000525459 NMRK1Q9NWW6 199 aa17.81■□□□□ 0.44
PTPRK-218ENST00000525459 A0A1B0GTL3 188 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 TMEM8BA6NDV4 472 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 KLF11O14901 512 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 NSA2O95478 260 aaKnown RBP17.8■□□□□ 0.44
PTPRK-218ENST00000525459 HSPA4LO95757 839 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 NTRK1P04629 796 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 CTSBP07858 339 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 FGF4P08620 206 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 CHN1P15882 459 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 ZNF28P17035 718 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 PTX3P26022 381 aaPredicted RBP17.8■□□□□ 0.44
PTPRK-218ENST00000525459 TSFMP43897 325 aaKnown RBP17.8■□□□□ 0.44
PTPRK-218ENST00000525459 AVPR1BP47901 424 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 ABCE1P61221 599 aaKnown RBP17.8■□□□□ 0.44
PTPRK-218ENST00000525459 CSTF3Q12996 717 aaKnown RBP17.8■□□□□ 0.44
PTPRK-218ENST00000525459 CUL3Q13618 768 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 TRIM40Q6P9F5 258 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 RNF165Q6ZSG1 346 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 VN1R5Q7Z5H4 357 aa17.8■□□□□ 0.44
PTPRK-218ENST00000525459 OR2L5Q8NG80 312 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms