RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 INSM1Q01101 510 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 PWP1Q13610 501 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 GALNTL6Q49A17 601 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 KHDRBS2Q5VWX1 349 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 Q6ZSR9 355 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 CHSY3Q70JA7 882 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 PIGWQ7Z7B1 504 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 B3GNT8Q7Z7M8 397 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 OR4N4Q8N0Y3 316 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 NT5CQ8TCD5 201 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 ACTRT2Q8TDY3 377 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 STON2Q8WXE9 905 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 MAELQ96JY0 434 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 PPP3R2Q96LZ3 170 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 OR52B2Q96RD2 323 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 MACROD1Q9BQ69 325 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 OR51B5Q9H339 312 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 AKTIPQ9H8T0 292 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 LRTM1Q9HBL6 345 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 VPS29Q9UBQ0 182 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 GIMAP2Q9UG22 337 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 CDV3Q9UKY7 258 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 CCL27Q9Y4X3 112 aa15.12■□□□□ 0.01
TSPAN4-213ENST00000524895 SPAARA0A1B0GVQ0 90 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 SAP18O00422 153 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 TXNDC9O14530 226 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 LSM1O15116 133 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 P2RX6O15547 441 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 HCRTR1O43613 425 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 PEX11AO75192 247 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 CSTF2P33240 577 aaKnown RBP eCLIP15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 GABRA4P48169 554 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 RAP1GDS1P52306 607 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 PDX1P52945 283 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 STXBP1P61764 594 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 RPL38P63173 70 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 ZFP36L1Q07352 338 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 CUL3Q13618 768 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 GPR19Q15760 415 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 HKDC1Q2TB90 917 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 AP5B1Q2VPB7 878 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 TMEM35AQ53FP2 167 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 TOR1AIP1Q5JTV8 583 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 CEP70Q8NHQ1 597 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 TM4SF19Q96DZ7 209 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 F2RL3Q96RI0 385 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 CCDC28BQ9BUN5 200 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 REXO4Q9GZR2 422 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 C1orf109Q9NX04 203 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 ADAMTS20P59510 1910 aa15.11■□□□□ 0.01
TSPAN4-213ENST00000524895 LRIT2A6NDA9 550 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 URADA6NGE7 173 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 TMEM150CB9EJG8 249 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 E9PBE3 544 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 AGRPO00253 132 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 SLC30A4O14863 429 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 ZSCAN9O15535 394 aaPredicted RBP15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 KLHL41O60662 606 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 SEC22BO75396 215 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 SEMA3DO95025 777 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 TBX6O95947 436 aaPredicted RBP15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 FTH1P19P0C7X4 201 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 MSL3P1P0C860 447 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 FOLR1P15328 257 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 LBPP18428 481 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 PRPH2P23942 346 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 HNRNPH1P31943 449 aaKnown RBP15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 CCKBRP32239 447 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 NOVA1P51513 510 aaKnown RBP15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 SIM1P81133 766 aaPredicted RBP15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 ACY1Q03154 408 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 TGM3Q08188 693 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 ACSM2AQ08AH3 577 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 TUBB3Q13509 450 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 LSM12Q3MHD2 195 aaKnown RBP15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 SPIN4Q56A73 249 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 TCTE1Q5JU00 501 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 C6orf136Q5SQH8 315 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 WASHC2DQ5SRD0 308 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 DEPDC1Q5TB30 811 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 ACSM2BQ68CK6 577 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 DHRS13Q6UX07 377 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 LARP4Q71RC2 724 aaKnown RBP eCLIP15.1■□□□□ 0.012e-6■■■■■ 32.5
TSPAN4-213ENST00000524895 ZFAND4Q86XD8 727 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 FNDC5Q8NAU1 212 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 CCDC197Q8NCU1 140 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 AGBL5Q8NDL9 886 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 MRPL1Q9BYD6 325 aaKnown RBP15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 STRADBQ9C0K7 418 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 SLC6A16Q9GZN6 736 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 STARD5Q9NSY2 213 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 AHSPQ9NZD4 102 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 AKAP7Q9P0M2 348 aaPredicted RBP15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 TRIM33Q9UPN9 1127 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 ARL2BPQ9Y2Y0 163 aa15.1■□□□□ 0.01
TSPAN4-213ENST00000524895 NPIPB8E9PQR5 432 aa15.09■□□□□ 0.01
TSPAN4-213ENST00000524895 TMX2-CTNND1H3BSU7 103 aa15.09■□□□□ 0.01
TSPAN4-213ENST00000524895 ERI3O43414 337 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-213ENST00000524895 OR2B3O76000 313 aa15.09■□□□□ 0.01
TSPAN4-213ENST00000524895 MYO1DO94832 1006 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms