RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 SLCO4A1Q96BD0 722 aa4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 MRPL38Q96DV4 380 aaKnown RBP4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 DTD2Q96FN9 168 aa4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 LURAP1Q96LR2 239 aa4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 DDX50Q9BQ39 737 aaKnown RBP4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 NUSAP1Q9BXS6 441 aaKnown RBP4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 CARD9Q9H257 536 aa4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 HSD3B7Q9H2F3 369 aa4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 TNMDQ9H2S6 317 aa4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 TMEM245Q9H330 911 aa4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 FNDC4Q9H6D8 234 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 ATP13A3Q9H7F0 1226 aa4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 ZNF71Q9NQZ8 489 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 INTS9Q9NV88 658 aaKnown RBP4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 FETUBQ9UGM5 382 aa4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 GMEB2Q9UKD1 530 aa4.13□□□□□ -1.75
HMGB1P1-201ENST00000522557 SPATA31D1Q6ZQQ2 1576 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 FAM172BPA6NC97 362 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 CACNB4O00305 520 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 NGFP01138 241 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 MMP10P09238 476 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 LHCGRP22888 699 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 SSTR1P30872 391 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 CEACAM8P31997 349 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 ATP6V1E1P36543 226 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 DVL1P1P54792 670 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 GPR50Q13585 617 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 GK2Q14410 553 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 EPC2Q52LR7 807 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 CTR9Q6PD62 1173 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 SLC25A47Q6Q0C1 308 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 G2E3Q7L622 706 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 SLC16A9Q7RTY1 509 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 DCUN1D3Q8IWE4 304 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 CCDC63Q8NA47 563 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 DMBX1Q8NFW5 382 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 PSMA8Q8TAA3 256 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 URGCPQ8TCY9 931 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 APOBEC4Q8WW27 367 aaKnown RBP4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 SLC13A3Q8WWT9 602 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 TM9SF4Q92544 642 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 FAM46BQ96A09 425 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 PGLYRP2Q96PD5 576 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 NINJ2Q9NZG7 142 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 MOSPD1Q9UJG1 213 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 FAF1Q9UNN5 650 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 R4GN57 208 aa4.12□□□□□ -1.75
HMGB1P1-201ENST00000522557 A0A087WUV0 522 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 TRBV2A0A0J9YWF9 115 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 MAGEB16A2A368 324 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 TLR4O00206 839 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 ZNF197O14709 1029 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 TEX28O15482 410 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 STBD1O95210 358 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 CXCL10P02778 98 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 FAM157CP0CG43 387 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 SKILP12757 684 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 P4HA1P13674 534 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 AHCYP23526 432 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 SFTPDP35247 375 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 TNFSF10P50591 281 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 CSNK2BP67870 215 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 TRIM29Q14134 588 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 ZNF790Q6PG37 636 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 TMEM207Q6UWW9 146 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 GET4Q7L5D6 327 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 GPC2Q8N158 579 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 HDDC3Q8N4P3 179 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 FAM89BQ8N5H3 189 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 SIDT2Q8NBJ9 832 aaKnown RBP4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 OR13C3Q8NGS6 347 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 KIAA1524Q8TCG1 905 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 ZNRF4Q8WWF5 429 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 GGHQ92820 318 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 TMEM186Q96B77 213 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 ZNF354BQ96LW1 612 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 BTBD9Q96Q07 612 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 ZNF577Q9BSK1 485 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 UPF2Q9HAU5 1272 aaKnown RBP4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 PANK4Q9NVE7 773 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 TMEM181Q9P2C4 612 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 PRDM4Q9UKN5 801 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 ELF5Q9UKW6 265 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 ZNF510Q9Y2H8 683 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 RPH3AQ9Y2J0 694 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 PPP2R2CQ9Y2T4 447 aa4.11□□□□□ -1.75
HMGB1P1-201ENST00000522557 C2orf92A0A1B0GVN3 265 aa4.1□□□□□ -1.75
HMGB1P1-201ENST00000522557 SNURFLB1AK76 121 aa4.1□□□□□ -1.75
HMGB1P1-201ENST00000522557 ERVV-2B6SEH9 535 aa4.1□□□□□ -1.75
HMGB1P1-201ENST00000522557 KLF11O14901 512 aa4.1□□□□□ -1.75
HMGB1P1-201ENST00000522557 MLNRO43193 412 aa4.1□□□□□ -1.75
HMGB1P1-201ENST00000522557 SEC24AO95486 1093 aa4.1□□□□□ -1.75
HMGB1P1-201ENST00000522557 ATP1A1P05023 1023 aaKnown RBP4.1□□□□□ -1.75
HMGB1P1-201ENST00000522557 ALPPP05187 535 aa4.1□□□□□ -1.75
HMGB1P1-201ENST00000522557 SBK2P0C263 348 aa4.1□□□□□ -1.75
HMGB1P1-201ENST00000522557 ALPPL2P10696 532 aa4.1□□□□□ -1.75
HMGB1P1-201ENST00000522557 CYP3A5P20815 502 aa4.1□□□□□ -1.75
HMGB1P1-201ENST00000522557 ACP1P24666 158 aa4.1□□□□□ -1.75
HMGB1P1-201ENST00000522557 EDNRAP25101 427 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms