RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 GDE1Q9NZC3 331 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 SLCO3A1Q9UIG8 710 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 M0QX08 132 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 SYNGR4O95473 234 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 WDR4P57081 412 aaKnown RBP15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 ADAM8P78325 824 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 ZNF598Q86UK7 904 aaKnown RBP15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 TRIB3Q96RU7 358 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 EBF4Q9BQW3 602 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 RNF11Q9Y3C5 154 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 FAM208AQ9UK61 1670 aaKnown RBP15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 ZNF879B4DU55 563 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 C8orf89P0DMQ9 161 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 DRD1P21728 446 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 LASP1Q14847 261 aaKnown RBP15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 PCBP2Q15366 365 aaKnown RBP eCLIP15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 DCAF12L1Q5VU92 463 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 ALG1LQ6GMV1 187 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 SLC36A4Q6YBV0 504 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 DDX1Q92499 740 aaKnown RBP15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 CPNE2Q96FN4 548 aaPredicted RBP15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 CST11Q9H112 138 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 UPB1Q9UBR1 384 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 RARRES3Q9UL19 164 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 A0A075B6Q4 140 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 OR6C74A6NCV1 312 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 TTC34A8MYJ7 566 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 AREL1O15033 823 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 SOX30O94993 753 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 TMEM198Q66K66 360 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 CHERPQ8IWX8 916 aaKnown RBP15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 CCDC36Q8IYA8 594 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 SETD6Q8TBK2 473 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 OSBPL7Q9BZF2 842 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 SIGLEC1Q9BZZ2 1709 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 IGLON5A6NGN9 336 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 ITGA10O75578 1167 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 HOXA11P31270 313 aaPredicted RBP15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 TM4SF4P48230 202 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 HSF2Q03933 536 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 TIFABQ6ZNK6 161 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 XKR8Q9H6D3 395 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 RMI1Q9H9A7 625 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 TMEM5Q9Y2B1 443 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 RPLP0P05388 317 aaKnown RBP15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 C1GALT1C1LP0DN25 315 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 FBLP22087 321 aaKnown RBP15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 PON2Q15165 354 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 CRTC2Q53ET0 693 aaPredicted RBP15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 KIAA0319Q5VV43 1072 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 CEP97Q8IW35 865 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 KLHL36Q8N4N3 616 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 C1orf216Q8TAB5 229 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 FIBINQ8TAL6 211 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 PHF12Q96QT6 1004 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 CMKLR1Q99788 373 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 COQ10BQ9H8M1 238 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 RC3H2Q9HBD1 1191 aaKnown RBP15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 HCN2Q9UL51 889 aa15.72■□□□□ 0.11
PCDHA3-201ENST00000522353 LILRB3O75022 631 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 FARS2O95363 451 aaKnown RBP15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 RNH1P13489 461 aaKnown RBP15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 MATN1P21941 496 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 DGKQP52824 942 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 E2F2Q14209 437 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 AKIRIN2Q53H80 203 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 ZSCAN4Q8NAM6 433 aaPredicted RBP15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 C9orf43Q8TAL5 461 aaPredicted RBP15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 ASB9Q96DX5 294 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 SIGLEC10Q96LC7 697 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 TGM7Q96PF1 710 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 CD180Q99467 661 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 PAAF1Q9BRP4 392 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 ETAA1Q9NY74 926 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 IL33O95760 270 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 RABIFP47224 123 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 SMSP52788 366 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 DAG1Q14118 895 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 PON3Q15166 354 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 FIP1L1Q6UN15 594 aaKnown RBP15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 SATL1Q86VE3 508 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 ZC3H3Q8IXZ2 948 aaKnown RBP15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 PKP4Q99569 1192 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 POFUT2Q9Y2G5 429 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 KLF11O14901 512 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 OR2B3O76000 313 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 BEST1O76090 585 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 ACRV1P26436 265 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 MTTPP55157 894 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 POU6F2P78424 691 aaPredicted RBP15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 SCAPQ12770 1279 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 CBX3Q13185 183 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 RNASE12Q5GAN4 147 aaKnown RBP15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 CLEC12AQ5QGZ9 265 aa15.71■□□□□ 0.11
PCDHA3-201ENST00000522353 FAM170BA6NMN3 283 aa15.71■□□□□ 0.1
PCDHA3-201ENST00000522353 OPN1SWP03999 348 aa15.71■□□□□ 0.1
PCDHA3-201ENST00000522353 C6P13671 934 aa15.71■□□□□ 0.1
PCDHA3-201ENST00000522353 OR3A3P47888 321 aa15.71■□□□□ 0.1
PCDHA3-201ENST00000522353 OR3A2P47893 321 aa15.71■□□□□ 0.1
PCDHA3-201ENST00000522353 KCNC1P48547 511 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms