RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 R4GN57 208 aa3.06□□□□□ -1.92
HMGN1P28-201ENST00000521340 NPC1L1Q9UHC9 1359 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 FAM205AQ6ZU69 1335 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 ATP6AP2A0A1C7CYW4 349 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 KRT87PA6NCN2 255 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 SLC15A5A6NIM6 579 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 SNURFLB1AK76 121 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 ZNF732B4DXR9 585 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 IKBKBO14920 756 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 P2RX6O15547 441 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 KCNAB3O43448 404 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 KIF5CO60282 957 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 SOCS5O75159 536 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 B3GALNT1O75752 331 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 PTBP3O95758 552 aaKnown RBP3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 NUDT17P0C025 328 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 FAM157CP0CG43 387 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 ODC1P11926 461 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 B4GALT1P15291 398 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 FUT1P19526 365 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 MAPK3P27361 379 aaPredicted RBP3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 GJB2P29033 226 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 CEACAM8P31997 349 aaPredicted RBP3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 KCNJ4P48050 445 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 DLX5P56178 289 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 CLDN17P56750 224 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 HERV-K104P61576 105 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 HTD2P86397 168 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 CETN1Q12798 172 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 GPR17Q13304 367 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 GPR50Q13585 617 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 SMC1AQ14683 1233 aaKnown RBP3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 ZRSR1Q15695 479 aaKnown RBP3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 ZNF542PQ5EBM4 170 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 HERC4Q5GLZ8 1057 aaPredicted RBP3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 TOR1AIP1Q5JTV8 583 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 WBP2NLQ6ICG8 309 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 SPSB3Q6PJ21 355 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 TMEM207Q6UWW9 146 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 MFSD7Q6UXD7 560 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 RBMS3Q6XE24 437 aaKnown RBP3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 SLC16A9Q7RTY1 509 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 TRPT1Q86TN4 253 aaKnown RBP3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 STHQ8IWL8 128 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 CDK20Q8IZL9 346 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 GPC2Q8N158 579 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 FBXW8Q8N3Y1 598 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 MARVELD2Q8N4S9 558 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 DCLK2Q8N568 766 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 CCDC63Q8NA47 563 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 TMEM185AQ8NFB2 350 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 OR7A2PQ8NGA2 310 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 OR2T11Q8NH01 316 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 SECTM1Q8WVN6 248 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 CD101Q93033 1021 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 ZNF524Q96C55 264 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 IDI2Q9BXS1 227 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 HIPK2Q9H2X6 1198 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 C6orf106Q9H6K1 298 aaPredicted RBP3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 CHST11Q9NPF2 352 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 PIGVQ9NUD9 493 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 PANK4Q9NVE7 773 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 DONSONQ9NYP3 566 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 TAS2R3Q9NYW6 316 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 SPASTQ9UBP0 616 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 IL36AQ9UHA7 158 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 UBQLN2Q9UHD9 624 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 PILRAQ9UKJ1 303 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 PRDM4Q9UKN5 801 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 PLEKHA6Q9Y2H5 1048 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 PPP2R2CQ9Y2T4 447 aa3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 STRAPQ9Y3F4 350 aaKnown RBP3.05□□□□□ -1.92
HMGN1P28-201ENST00000521340 TOP2BQ02880 1626 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 CCDC88BA6NC98 1476 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 PTPRUQ92729 1446 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 UBE4BO95155 1302 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 WDR81Q562E7 1941 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 RNF103-CHMP3A0A140T963 221 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 PLSCR5A0PG75 271 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 CCDC69A6NI79 296 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 RNF103O00237 685 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 LRP3O75074 770 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 SAP30O75446 220 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 CRCPO75575 148 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 CPNE6O95741 557 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 BMP15O95972 392 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 PDGFBP01127 241 aaPredicted RBP3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 EPOP01588 193 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 F7P08709 466 aaPredicted RBP3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 CD48P09326 243 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 FGF3P11487 239 aaPredicted RBP3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 ETS1P14921 441 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 UGT1A6P19224 532 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 FCARP24071 287 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 EDNRAP25101 427 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 ITGA3P26006 1051 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 SFTPDP35247 375 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 TNFSF10P50591 281 aa3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 LINC01547P58512 204 aaPredicted RBP3.04□□□□□ -1.92
HMGN1P28-201ENST00000521340 ERVFC1-1P60608 527 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms