RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 CCDC177Q9NQR7 707 aaPredicted RBP12.72□□□□□ -0.37
SPARC-203ENST00000521327 LANCL2Q9NS86 450 aa12.72□□□□□ -0.37
SPARC-203ENST00000521327 HRH3Q9Y5N1 445 aa12.72□□□□□ -0.37
SPARC-203ENST00000521327 NCOA6Q14686 2063 aaPredicted RBP12.72□□□□□ -0.37
SPARC-203ENST00000521327 NKX2-6A6NCS4 301 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 TFECO14948 347 aaPredicted RBP12.71□□□□□ -0.37
SPARC-203ENST00000521327 LCMT2O60294 686 aaKnown RBP12.71□□□□□ -0.37
SPARC-203ENST00000521327 DNAJB6O75190 326 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 MPC1LP0DKB6 136 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 IGFBP2P18065 325 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 IL10P22301 178 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 RFC3P40938 356 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 SKIV2L2P42285 1042 aaKnown RBP12.71□□□□□ -0.37
SPARC-203ENST00000521327 KCTD19Q17RG1 926 aaPredicted RBP12.71□□□□□ -0.37
SPARC-203ENST00000521327 KIAA0930Q6ICG6 404 aaPredicted RBP12.71□□□□□ -0.37
SPARC-203ENST00000521327 CAPN13Q6MZZ7 669 aaPredicted RBP12.71□□□□□ -0.37
SPARC-203ENST00000521327 CYHR1Q6ZMK1 362 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 UBE2R2Q712K3 238 aaPredicted RBP12.71□□□□□ -0.37
SPARC-203ENST00000521327 CD163Q86VB7 1156 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 CYP4X1Q8N118 509 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 MARVELD2Q8N4S9 558 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 TMEM125Q96AQ2 219 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 OR1F2PQ96R84 312 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 UCK2Q9BZX2 261 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 NPDC1Q9NQX5 325 aaPredicted RBP12.71□□□□□ -0.37
SPARC-203ENST00000521327 TNFRSF10DQ9UBN6 386 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 SOX13Q9UN79 622 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 SH2B3Q9UQQ2 575 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 VPS9D1Q9Y2B5 631 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 MED16Q9Y2X0 877 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 SLC22A7Q9Y694 548 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 CPAMD8Q8IZJ3 1885 aa12.71□□□□□ -0.37
SPARC-203ENST00000521327 NIPBLQ6KC79 2804 aaeCLIP12.7□□□□□ -0.38
SPARC-203ENST00000521327 CTAGE9A4FU28 777 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 FAM90A27PA6NNH2 459 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 CDK2AP1O14519 115 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 CDC40O60508 579 aaKnown RBP eCLIP12.7□□□□□ -0.38
SPARC-203ENST00000521327 B4GALT2O60909 372 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 AVILO75366 819 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 FHP07954 510 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 PTMSP20962 102 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 MEOX1P50221 254 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 ITGA8P53708 1063 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 TERF1P54274 439 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 MLF1P58340 268 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 TBPL1P62380 186 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 MPP1Q00013 466 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 RPS6KA1Q15418 735 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 SKOR2Q2VWA4 1001 aaPredicted RBP12.7□□□□□ -0.38
SPARC-203ENST00000521327 TMEM211Q6ICI0 200 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 GSTA5Q7RTV2 222 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 PIWIL4Q7Z3Z4 852 aaKnown RBP12.7□□□□□ -0.38
SPARC-203ENST00000521327 SULF2Q8IWU5 870 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 LILRB4Q8NHJ6 448 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 ASB5Q8WWX0 329 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 ALKBH8Q96BT7 664 aaKnown RBP12.7□□□□□ -0.38
SPARC-203ENST00000521327 TBC1D20Q96BZ9 403 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 DESI2Q9BSY9 194 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 TSGA10Q9BZW7 698 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 PCBD2Q9H0N5 130 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 TRIM45Q9H8W5 580 aaPredicted RBP12.7□□□□□ -0.38
SPARC-203ENST00000521327 KCNJ16Q9NPI9 418 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 INTS10Q9NVR2 710 aaKnown RBP12.7□□□□□ -0.38
SPARC-203ENST00000521327 KLHL42Q9P2K6 505 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 RNF6Q9Y252 685 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 CAPN6Q9Y6Q1 641 aa12.7□□□□□ -0.38
SPARC-203ENST00000521327 TCRBV7S3A2A0A539 114 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 USP27XA6NNY8 438 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 FOXO6A8MYZ6 492 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 KLRC4-KLRK1H3BQV0 150 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 CHST10O43529 356 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 HS6ST1O60243 411 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 PRMT3O60678 531 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 PDE9AO76083 593 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 SLC35G6P0C7Q6 338 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 ENO3P13929 434 aaPredicted RBP12.69□□□□□ -0.38
SPARC-203ENST00000521327 CD99P14209 185 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 PAMP19021 973 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 TRHRP34981 398 aaPredicted RBP12.69□□□□□ -0.38
SPARC-203ENST00000521327 GRK3P35626 688 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 HLCSP50747 726 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 OLR1P78380 273 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 CTBP1Q13363 440 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 HERC3Q15034 1050 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 CCNG2Q16589 344 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 ZNF470Q6ECI4 717 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 CASC4Q6P4E1 433 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 ZNF549Q6P9A3 640 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 C4orf22Q6V702 233 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 TMEM200AQ86VY9 491 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 C17orf64Q86WR6 236 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 CCDC71Q8IV32 467 aaPredicted RBP12.69□□□□□ -0.38
SPARC-203ENST00000521327 DENND6AQ8IWF6 608 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 CPNE9Q8IYJ1 553 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 POGLUT1Q8NBL1 392 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 MFSD9Q8NBP5 474 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 NRGNQ92686 78 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 RND1Q92730 232 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 KCNJ9Q92806 393 aa12.69□□□□□ -0.38
SPARC-203ENST00000521327 PTCHD1Q96NR3 888 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms