RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 NPAS2Q99743 824 aa11.72□□□□□ -0.53
CSMD1-205ENST00000519623 SPNS1Q9H2V7 528 aa11.72□□□□□ -0.53
CSMD1-205ENST00000519623 KCNF1Q9H3M0 494 aa11.72□□□□□ -0.53
CSMD1-205ENST00000519623 PPANQ9NQ55 473 aaKnown RBP11.72□□□□□ -0.53
CSMD1-205ENST00000519623 TRMT1Q9NXH9 659 aaKnown RBP11.72□□□□□ -0.53
CSMD1-205ENST00000519623 ABI3Q9P2A4 366 aa11.72□□□□□ -0.53
CSMD1-205ENST00000519623 C19orf25Q9UFG5 118 aaPredicted RBP11.72□□□□□ -0.53
CSMD1-205ENST00000519623 TEKT2Q9UIF3 430 aa11.72□□□□□ -0.53
CSMD1-205ENST00000519623 LRBAP50851 2863 aa11.72□□□□□ -0.53
CSMD1-205ENST00000519623 TRBC2A0A5B9 178 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 CTAGE15A4D2H0 777 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 ZNF860A6NHJ4 632 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 TP73O15350 636 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 MAN1A2O60476 641 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 GALR3O60755 368 aaPredicted RBP11.71□□□□□ -0.53
CSMD1-205ENST00000519623 RASAL1O95294 804 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 GUCA1CO95843 209 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 B3GALT4O96024 378 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 CRYABP02511 175 aaKnown RBP11.71□□□□□ -0.53
CSMD1-205ENST00000519623 UQCRHP07919 91 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 SLC35G6P0C7Q6 338 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 MYBL2P10244 700 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 TCP1P17987 556 aaKnown RBP11.71□□□□□ -0.53
CSMD1-205ENST00000519623 FRG1Q14331 258 aaKnown RBP11.71□□□□□ -0.53
CSMD1-205ENST00000519623 MORF4L2Q15014 288 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 HERC3Q15034 1050 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 NSDHLQ15738 373 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 SFT2D3Q587I9 215 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 C1QL3Q5VWW1 255 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 SBSNQ6UWP8 590 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 GFRALQ6UXV0 394 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 CTAGE6Q86UF2 777 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 FJX1Q86VR8 437 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 CREG2Q8IUH2 290 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 BEST3Q8N1M1 668 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 NT5CQ8TCD5 201 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 ATL1Q8WXF7 558 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 NEIL2Q969S2 332 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 CFAP36Q96G28 342 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 OR1F2PQ96R84 312 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 TRIM54Q9BYV2 358 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 KCNK13Q9HB14 408 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 MMP25Q9NPA2 562 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 CORO1CQ9ULV4 474 aaPredicted RBP11.71□□□□□ -0.53
CSMD1-205ENST00000519623 CHMP2BQ9UQN3 213 aa11.71□□□□□ -0.53
CSMD1-205ENST00000519623 MAGEB17A8MXT2 336 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 NDUFS4O43181 175 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 CHST10O43529 356 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 CDC123O75794 336 aaPredicted RBP11.7□□□□□ -0.54
CSMD1-205ENST00000519623 FHP07954 510 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 ENO2P09104 434 aaPredicted RBP11.7□□□□□ -0.54
CSMD1-205ENST00000519623 ALOX12P18054 663 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 AHRP35869 848 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 CD96P40200 585 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 SCTRP47872 440 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 ST13P50502 369 aaKnown RBP11.7□□□□□ -0.54
CSMD1-205ENST00000519623 ACTN3Q08043 901 aaPredicted RBP11.7□□□□□ -0.54
CSMD1-205ENST00000519623 TUBA3CQ13748 450 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 CSHL1Q14406 222 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 ABRAXAS2Q15018 415 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 EXT1Q16394 746 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 PPP1R3AQ16821 1122 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 DEFB134Q4QY38 66 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 ZNF766Q5HY98 468 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 SP5Q6BEB4 398 aaPredicted RBP11.7□□□□□ -0.54
CSMD1-205ENST00000519623 FAM45BPQ6NSW5 357 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 TUBA3EQ6PEY2 450 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 PAPD4Q6PIY7 484 aaKnown RBP11.7□□□□□ -0.54
CSMD1-205ENST00000519623 SYDE1Q6ZW31 735 aaPredicted RBP11.7□□□□□ -0.54
CSMD1-205ENST00000519623 CRLF3Q8IUI8 442 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 KLHL7Q8IXQ5 586 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 SLC34A3Q8N130 599 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 ANKRD53Q8N9V6 530 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 MDS2Q8NDY4 140 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 SUN3Q8TAQ9 357 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 FAM45AQ8TCE6 357 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 SLC5A11Q8WWX8 675 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 TSLPQ969D9 159 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 TBC1D20Q96BZ9 403 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 LRRC39Q96DD0 335 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 SIGLEC12Q96PQ1 595 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 RBCK1Q9BYM8 510 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 MOCS1Q9NZB8 636 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 ZFP69BQ9UJL9 534 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 PCDHGB6Q9Y5F9 930 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 PSAT1Q9Y617 370 aa11.7□□□□□ -0.54
CSMD1-205ENST00000519623 USP27XA6NNY8 438 aa11.69□□□□□ -0.54
CSMD1-205ENST00000519623 CDC7O00311 574 aa11.69□□□□□ -0.54
CSMD1-205ENST00000519623 UNC5CO95185 931 aa11.69□□□□□ -0.54
CSMD1-205ENST00000519623 SERPIND1P05546 499 aa11.69□□□□□ -0.54
CSMD1-205ENST00000519623 ZNF888P0CJ79 500 aaPredicted RBP11.69□□□□□ -0.54
CSMD1-205ENST00000519623 SMIM10L1P0DMW3 83 aa11.69□□□□□ -0.54
CSMD1-205ENST00000519623 ITGA8P53708 1063 aa11.69□□□□□ -0.54
CSMD1-205ENST00000519623 SLC26A5P58743 744 aa11.69□□□□□ -0.54
CSMD1-205ENST00000519623 OLR1P78380 273 aa11.69□□□□□ -0.54
CSMD1-205ENST00000519623 PMP22Q01453 160 aa11.69□□□□□ -0.54
CSMD1-205ENST00000519623 DR1Q01658 176 aa11.69□□□□□ -0.54
CSMD1-205ENST00000519623 HYAL2Q12891 473 aa11.69□□□□□ -0.54
CSMD1-205ENST00000519623 CBLBQ13191 982 aa11.69□□□□□ -0.54
CSMD1-205ENST00000519623 USP10Q14694 798 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms