RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 SYNPO2LQ9H987 977 aa22.37■■□□□ 1.17
SLIT3-204ENST00000518140 SIRT5Q9NXA8 310 aa22.37■■□□□ 1.17
SLIT3-204ENST00000518140 PCDHB14Q9Y5E9 798 aa22.37■■□□□ 1.17
SLIT3-204ENST00000518140 SCN2BO60939 215 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 UBTFL6P0CB48 400 aaPredicted RBP22.36■■□□□ 1.17
SLIT3-204ENST00000518140 ATP6V1B2P21281 511 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 PTPN6P29350 595 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 SHMT2P34897 504 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 KIR3DL1P43629 444 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 MC1RQ01726 317 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 GPR18Q14330 331 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 DEPDC1Q5TB30 811 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 SLC9B2Q86UD5 537 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 GPR180Q86V85 440 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 UBALD2Q8IYN6 164 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 MS4A8Q9BY19 250 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 FAM192AQ9GZU8 254 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 SRMSQ9H3Y6 488 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 NT5DC2Q9H857 520 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 OR6C2Q9NZP2 312 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 SDK1Q7Z5N4 2213 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 PLXND1Q9Y4D7 1925 aa22.36■■□□□ 1.17
SLIT3-204ENST00000518140 A0A1W2PR77 199 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 K7ESF4 209 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 PLPP1O14494 284 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 HAT1O14929 419 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 BCKDHBP21953 392 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 PHEXP78562 749 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 KHDRBS2Q5VWX1 349 aaKnown RBP22.35■■□□□ 1.17
SLIT3-204ENST00000518140 AURKBQ96GD4 344 aaPredicted RBP22.35■■□□□ 1.17
SLIT3-204ENST00000518140 ZNF717Q9BY31 904 aaPredicted RBP22.35■■□□□ 1.17
SLIT3-204ENST00000518140 GSDMCQ9BYG8 508 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 AICDAQ9GZX7 198 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 MIR1-1HGQ9H1L0 117 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 VCX3BQ9H321 246 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 PAPOLBQ9NRJ5 636 aaKnown RBP22.35■■□□□ 1.17
SLIT3-204ENST00000518140 TRBV5-3A0A0A0MS03 114 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 ARHGAP10A1A4S6 786 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 SCAMP2O15127 329 aaKnown RBP22.35■■□□□ 1.17
SLIT3-204ENST00000518140 PRMT3O60678 531 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 CTSEP14091 401 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 CALRP27797 417 aaKnown RBP22.35■■□□□ 1.17
SLIT3-204ENST00000518140 BCL6P41182 706 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 C21orf58P58505 322 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 PARGQ86W56 976 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 DHFR2Q86XF0 187 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 PDSS2Q86YH6 399 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 GJD3Q8N144 294 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 NAGSQ8N159 534 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 C16orf78Q8WTQ4 265 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 KCNH6Q9H252 994 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 CPNE7Q9UBL6 633 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.35■■□□□ 1.17
SLIT3-204ENST00000518140 MAN2B2Q9Y2E5 1009 aa22.35■■□□□ 1.17
SLIT3-204ENST00000518140 PPM1DO15297 605 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 SERPIND1P05546 499 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 NCK1P16333 377 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 JUNDP17535 347 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 CD38P28907 300 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 CXCL12P48061 93 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 EEFSECP57772 596 aaKnown RBP22.34■■□□□ 1.17
SLIT3-204ENST00000518140 OR4D2P58180 307 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 RUNDC3AQ59EK9 446 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 FOXB2Q5VYV0 432 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 MMP21Q8N119 569 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 CAMKK1Q8N5S9 505 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 CADM4Q8NFZ8 388 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 CREB3L4Q8TEY5 395 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 ITCHQ96J02 903 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 HSPA12BQ96MM6 686 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 KCTD14Q9BQ13 255 aaPredicted RBP22.34■■□□□ 1.17
SLIT3-204ENST00000518140 LRRC61Q9BV99 259 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 NUP214P35658 2090 aaPredicted RBP22.34■■□□□ 1.17
SLIT3-204ENST00000518140 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 HOXB9P17482 250 aaPredicted RBP22.34■■□□□ 1.17
SLIT3-204ENST00000518140 TPP2P29144 1249 aaPredicted RBP22.34■■□□□ 1.17
SLIT3-204ENST00000518140 ASMTP46597 345 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 RPS9P46781 194 aaKnown RBP22.34■■□□□ 1.17
SLIT3-204ENST00000518140 SRSF11Q05519 484 aaKnown RBP22.34■■□□□ 1.17
SLIT3-204ENST00000518140 ZNF763Q0D2J5 394 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 PLCL1Q15111 1095 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 UBE3DQ7Z6J8 389 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 TRIM73Q86UV7 250 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 SPPL2CQ8IUH8 684 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 TRIM48Q8IWZ4 208 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 TMEFF1Q8IYR6 380 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 CLECL1Q8IZS7 167 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 MFSD2AQ8NA29 543 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 FLVCR1-AS1Q8TAF5 88 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 SLC37A2Q8TED4 501 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 LHX9Q9NQ69 397 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 ADGRE2Q9UHX3 823 aa22.34■■□□□ 1.17
SLIT3-204ENST00000518140 MUC3AQ02505 3323 aa22.33■■□□□ 1.17
SLIT3-204ENST00000518140 EME2A4GXA9 379 aaPredicted RBP22.33■■□□□ 1.17
SLIT3-204ENST00000518140 VIPP01282 170 aa22.33■■□□□ 1.17
SLIT3-204ENST00000518140 PCSK2P16519 638 aa22.33■■□□□ 1.17
SLIT3-204ENST00000518140 TAS2R50P59544 299 aa22.33■■□□□ 1.17
SLIT3-204ENST00000518140 ABATP80404 500 aa22.33■■□□□ 1.17
SLIT3-204ENST00000518140 PRSS53Q2L4Q9 553 aa22.33■■□□□ 1.17
SLIT3-204ENST00000518140 ZNF385BQ569K4 471 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms