RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 HEXDCQ8WVB3 486 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 RAD54LQ92698 747 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 SYAP1Q96A49 352 aaPredicted RBP2.91□□□□□ -1.94
HERC4-215ENST00000515753 MOB3AQ96BX8 217 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 SPDL1Q96EA4 605 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 C5orf30Q96GV9 206 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 LRR1Q96L50 414 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 ZNF582Q96NG8 517 aaPredicted RBP2.91□□□□□ -1.94
HERC4-215ENST00000515753 NYXQ9GZU5 481 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 AKIRIN1Q9H9L7 192 aaPredicted RBP2.91□□□□□ -1.94
HERC4-215ENST00000515753 POLE3Q9NRF9 147 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 OLFML3Q9NRN5 406 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 TMEM161AQ9NX61 479 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 SLCO1C1Q9NYB5 712 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 NINJ2Q9NZG7 142 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 FBXL5Q9UKA1 691 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 C2CD2Q9Y426 696 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 SMAD5-AS1Q9Y6J3 95 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 AP1M2Q9Y6Q5 423 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 SLIT2O94813 1529 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 ANKARQ7Z5J8 1434 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 RRBP1Q9P2E9 1410 aaKnown RBP2.91□□□□□ -1.94
HERC4-215ENST00000515753 ACEP12821 1306 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 RALGAPBQ86X10 1494 aa2.9□□□□□ -1.94
HERC4-215ENST00000515753 BRD4O60885 1362 aaPredicted RBP2.9□□□□□ -1.94
HERC4-215ENST00000515753 SHPRHQ149N8 1683 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 TRBV2A0A0J9YWF9 115 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 A0A1W2PN81 502 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 A0A1W2PPQ1 181 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 ELOVL7A1L3X0 281 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 ANKUB1A6NFN9 424 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 TO15178 435 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 ST8SIA3O43173 380 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 EXTL3O43909 919 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 AKAP3O75969 853 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 KRT19P08727 400 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 C8orf89P0DMQ9 161 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 CKMT2P17540 419 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 EPORP19235 508 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 CCNA2P20248 432 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 CBLP22681 906 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 CHRNA7P36544 502 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 ATXN3P54252 364 aaPredicted RBP2.9□□□□□ -1.95
HERC4-215ENST00000515753 GMFBP60983 142 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 PPP2R2BQ00005 443 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 TRADDQ15628 312 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 SGCBQ16585 318 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 HSP90AA5PQ58FG0 334 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.9□□□□□ -1.95
HERC4-215ENST00000515753 TMEM182Q6ZP80 229 aaPredicted RBP2.9□□□□□ -1.95
HERC4-215ENST00000515753 MCM10Q7L590 875 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 ISCA2Q86U28 154 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 SFRP1Q8N474 314 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 ZNF611Q8N823 705 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 UXS1Q8NBZ7 420 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 ZBTB44Q8NCP5 570 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 ADAD2Q8NCV1 583 aaKnown RBP2.9□□□□□ -1.95
HERC4-215ENST00000515753 PPFIBP2Q8ND30 876 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 ZNF540Q8NDQ6 660 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 NCOA7Q8NI08 942 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 ST7LQ8TDW4 575 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 NSMAFQ92636 917 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 SEMA4DQ92854 862 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 TRIM44Q96DX7 344 aaPredicted RBP2.9□□□□□ -1.95
HERC4-215ENST00000515753 FAM111AQ96PZ2 611 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 IWS1Q96ST2 819 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 KCNK16Q96T55 309 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 FEVQ99581 238 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 OLFM1Q99784 485 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 CPNE1Q99829 537 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 BICC1Q9H694 974 aaKnown RBP2.9□□□□□ -1.95
HERC4-215ENST00000515753 MINDY3Q9H8M7 445 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 LIN28AQ9H9Z2 209 aaKnown RBP2.9□□□□□ -1.95
HERC4-215ENST00000515753 RNPEPL1Q9HAU8 725 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 SIX2Q9NPC8 291 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 SPG21Q9NZD8 308 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 FLRT3Q9NZU0 649 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 FETUBQ9UGM5 382 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 CPSF3Q9UKF6 684 aaKnown RBP2.9□□□□□ -1.95
HERC4-215ENST00000515753 MTUS1Q9ULD2 1270 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 RPH3AQ9Y2J0 694 aaPredicted RBP2.9□□□□□ -1.95
HERC4-215ENST00000515753 TDRKHQ9Y2W6 561 aaKnown RBP2.9□□□□□ -1.95
HERC4-215ENST00000515753 TRIM17Q9Y577 477 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 NAIPQ13075 1403 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 TNS3Q68CZ2 1445 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 CEP152O94986 1710 aa2.9□□□□□ -1.95
HERC4-215ENST00000515753 COL2A1P02458 1487 aaPredicted RBP2.9□□□□□ -1.95
HERC4-215ENST00000515753 STRCP1A6NGW2 1772 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 SYNJ2BP-COX16A0A087WUM0 186 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 IGHV4-61A0A0C4DH41 118 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 SMIM30A4D0T7 59 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 RGSL1A5PLK6 1076 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 DISP2A7MBM2 1401 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 UNC13BO14795 1591 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 SELENOFO60613 162 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 LUC7L3O95232 432 aaKnown RBP2.89□□□□□ -1.95
HERC4-215ENST00000515753 CAVIN2O95810 425 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 EML2O95834 649 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 IGLV1-44P01699 117 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 IGHV4-59P01825 116 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms