RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 PDLIM5Q96HC4 596 aaKnown RBP1.53□□□□□ -2.17
AC025539.1-201ENST00000515343 CFAP53Q96M91 514 aa1.53□□□□□ -2.17
AC025539.1-201ENST00000515343 RTP3Q9BQQ7 232 aa1.53□□□□□ -2.17
AC025539.1-201ENST00000515343 SLC7A5P2Q9GIP4 190 aa1.53□□□□□ -2.17
AC025539.1-201ENST00000515343 SDCBP2Q9H190 292 aa1.53□□□□□ -2.17
AC025539.1-201ENST00000515343 OPA3Q9H6K4 179 aa1.53□□□□□ -2.17
AC025539.1-201ENST00000515343 APOBEC3GQ9HC16 384 aaKnown RBP1.53□□□□□ -2.17
AC025539.1-201ENST00000515343 IARS2Q9NSE4 1012 aaKnown RBP1.53□□□□□ -2.17
AC025539.1-201ENST00000515343 CHCHD3Q9NX63 227 aaKnown RBP1.53□□□□□ -2.17
AC025539.1-201ENST00000515343 TBC1D7Q9P0N9 293 aa1.53□□□□□ -2.17
AC025539.1-201ENST00000515343 TRAF3IP3Q9Y228 551 aa1.53□□□□□ -2.17
AC025539.1-201ENST00000515343 SIPA1L3O60292 1781 aaPredicted RBP1.53□□□□□ -2.17
AC025539.1-201ENST00000515343 IGLV5-45A0A087WSX0 123 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 A0A0G2JPF8 293 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 HNRNPCL3B7ZW38 293 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 TMEM189-UBE2V1I3L0A0 370 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 FCGR3BO75015 233 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 PIGNO95427 931 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 PDGFBP01127 241 aaPredicted RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 TPM2P07951 284 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 HNRNPCL4P0DMR1 293 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 GNAZP19086 355 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ELAVL4P26378 380 aaKnown RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 KIF5BP33176 963 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 NBL1P41271 181 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 PCYT1AP49585 367 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 CDH13P55290 713 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 OR1D5P58170 312 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 SCN1BQ07699 218 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 UBE2V1Q13404 147 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 PTPN14Q15678 1187 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ASIC2Q16515 512 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 KRTAP24-1Q3LI83 254 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ZC2HC1CQ53FD0 456 aaPredicted RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 C1orf141Q5JVX7 400 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 MPP7Q5T2T1 576 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 C19orf48Q6RUI8 117 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 C9orf139Q6ZV77 190 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 DET1Q7L5Y6 550 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 G2E3Q7L622 706 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 PIWIL4Q7Z3Z4 852 aaKnown RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ZNF554Q86TJ5 538 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 SFR1Q86XK3 245 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 CNGA4Q8IV77 575 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 OR8H3Q8N146 312 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ZNF619Q8N2I2 560 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ATAD1Q8NBU5 361 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 HPSE2Q8WWQ2 592 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 N4BP2L2Q92802 583 aaPredicted RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 IGSF21Q96ID5 467 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 CDX2Q99626 313 aaPredicted RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 OVOL2Q9BRP0 275 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 TLE6Q9H808 572 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 XAB2Q9HCS7 855 aaKnown RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 MYNNQ9NPC7 610 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 PFDN4Q9NQP4 134 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 B3GAT1Q9P2W7 334 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 CLIP2Q9UDT6 1046 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 GCN1Q92616 2671 aaKnown RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 RYR2Q92736 4967 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 PRSS51A0A1B0GVH4 220 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 GLRA3O75311 464 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ZNF254O75437 659 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 AP2A2O94973 939 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 PAPSS2O95340 614 aaPredicted RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 GGPS1O95749 300 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 EML2O95834 649 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 MMP10P09238 476 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 HAPLN1P10915 354 aaPredicted RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ZNF24P17028 368 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ITGA2P17301 1181 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 GJA1P17302 382 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ERCC2P18074 760 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 FCARP24071 287 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 OR3A3P47888 321 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 FUT6P51993 359 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 THOP1P52888 689 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 STX1BP61266 288 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 GBE1Q04446 702 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ZNF672Q499Z4 452 aaPredicted RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 FILIP1LQ4L180 1135 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 SFMBT2Q5VUG0 894 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 MFSD12Q6NUT3 480 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 MFSD6Q6ZSS7 791 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ADCK2Q7Z695 626 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 TLK2Q86UE8 772 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 TMEM173Q86WV6 379 aaPredicted RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 COMMD2Q86X83 199 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 LINC00469Q8N7U9 141 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 OLIG1Q8TAK6 271 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ANKRD49Q8WVL7 239 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 MED30Q96HR3 178 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 THOC3Q96J01 351 aaKnown RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 MGME1Q9BQP7 344 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 TCHPQ9BT92 498 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 TRMT61BQ9BVS5 477 aaKnown RBP1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 KLHL4Q9C0H6 718 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 HIPK2Q9H2X6 1198 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 SLC28A3Q9HAS3 691 aa1.52□□□□□ -2.17
AC025539.1-201ENST00000515343 ADPRHL2Q9NX46 363 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms