RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	SPAG8	Q99932	426 aa	Predicted RBP	4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	LRRC2	Q9BYS8	371 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	OR2B2	Q9GZK3	357 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	C5orf66	Q9H5L9	145 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	MIS18A	Q9NYP9	233 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CGN	Q9P2M7	1197 aa	Known RBP	4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PLA2G4C	Q9UP65	541 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	TNN	Q9UQP3	1299 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	RIPK3	Q9Y572	518 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CCDC162P	A2VCL2	907 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	DNAJC9-AS1	A6NH13	148 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CHUK	O15111	745 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CLN5	O75503	358 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	STBD1	O95210	358 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	NR3C1	P04150	777 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	YES1	P07947	543 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CA6	P23280	308 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	DNAJB1	P25685	340 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	MARCKS	P29966	332 aa	Predicted RBP	4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PITPNB	P48739	271 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PDLIM4	P50479	330 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	DVL1P1	P54792	670 aa	Predicted RBP	4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	GAS1	P54826	345 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	KCNK10	P57789	538 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CDH18	Q13634	790 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	GIT2	Q14161	759 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CEBPE	Q15744	281 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	KIF19	Q2TAC6	998 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	WSCD2	Q2TBF2	565 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ANKDD1A	Q495B1	522 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	XKR3	Q5GH77	459 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	TUBA1A	Q71U36	451 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ANO5	Q75V66	913 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SLC16A9	Q7RTY1	509 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	TMEM99	Q8N816	258 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CHURC1	Q8WUH1	139 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PIK3R3	Q92569	461 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SEPT8	Q92599	483 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ESAM	Q96AP7	390 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	VPS39	Q96JC1	886 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	C4orf45	Q96LM5	186 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	GUCD1	Q96NT3	240 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CDCA3	Q99618	268 aa	Predicted RBP	4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ASCL2	Q99929	193 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	TUBA1C	Q9BQE3	449 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	NTMT1	Q9BV86	223 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ATG10	Q9H0Y0	220 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	TRPV6	Q9H1D0	765 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CPVL	Q9H3G5	476 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	DPEP2	Q9H4A9	486 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	UPF2	Q9HAU5	1272 aa	Known RBP	4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SLC35D1	Q9NTN3	355 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PANK4	Q9NVE7	773 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ANKMY1	Q9P2S6	941 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	IL36A	Q9UHA7	158 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	TBK1	Q9UHD2	729 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	FAM153A	Q9UHL3	310 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PSORS1C1	Q9UIG5	152 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	EXOC7	Q9UPT5	735 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	COLEC10	Q9Y6Z7	277 aa		4.55	□□□□□ -1.68
CALCOCO2-222	ENST00000514006		A0A1W2PS18	150 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	OR6A2	O95222	327 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	DIRAS3	O95661	229 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SFTPB	P07988	381 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	AKT2	P31751	481 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	HSPA1L	P34931	641 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SLC6A12	P48065	614 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	TNFSF10	P50591	281 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	HMGA2	P52926	109 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	C21orf58	P58505	322 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CCZ1B	P86790	482 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CCZ1	P86791	482 aa	Predicted RBP	4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	DMP1	Q13316	513 aa	Predicted RBP	4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SQLE	Q14534	574 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CARTPT	Q16568	116 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	STX1A	Q16623	288 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	UGT3A1	Q6NUS8	523 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	GBP7	Q8N8V2	638 aa	Predicted RBP	4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	RNF149	Q8NC42	400 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	IPMK	Q8NFU5	416 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SPATA18	Q8TC71	538 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SECTM1	Q8WVN6	248 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	NEUROG1	Q92886	237 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SCRN2	Q96FV2	425 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ZNF583	Q96ND8	569 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PSD2	Q9BQI7	771 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	RHNO1	Q9BSD3	238 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	UBAC1	Q9BSL1	405 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	DCLRE1B	Q9H816	532 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	EXOC1	Q9NV70	894 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	FAF1	Q9UNN5	650 aa	Predicted RBP	4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ERVK-19	Q9WJR5	959 aa		4.54	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	IGLV9-49	A0A0B4J1Y8	123 aa		4.53	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	TRBV5-5	A0A0J9YX44	114 aa		4.53	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	MPHOSPH10	O00566	681 aa	Known RBP	4.53	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ATP6V0E1	O15342	81 aa		4.53	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	OAZ2	O95190	189 aa		4.53	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ZBTB11	O95625	1053 aa	Predicted RBP	4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms