RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 VRK3Q8IV63 474 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 FAM217AQ8IXS0 508 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 KLHDC8AQ8IYD2 350 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 APCDD1Q8J025 514 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 LGI4Q8N135 537 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 PCSK9Q8NBP7 692 aaKnown RBP11.14□□□□□ -0.63
SNX25-205ENST00000512853 COQ8BQ96D53 544 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 TRMT2BQ96GJ1 504 aaKnown RBP11.14□□□□□ -0.63
SNX25-205ENST00000512853 Q96MT0 163 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 SDHCQ99643 169 aaPredicted RBP11.14□□□□□ -0.63
SNX25-205ENST00000512853 RNF167Q9H6Y7 350 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 NEK6Q9HC98 313 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 PRDM8Q9NQV8 689 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 CNOT2Q9NZN8 540 aaKnown RBP11.14□□□□□ -0.63
SNX25-205ENST00000512853 VPS4AQ9UN37 437 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 CFL2Q9Y281 166 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 PPIL1Q9Y3C6 166 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 CFAP20Q9Y6A4 193 aaKnown RBP11.14□□□□□ -0.63
SNX25-205ENST00000512853 EFCAB10A6NFE3 127 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 GREM1O60565 184 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 APOA1P02647 267 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 SERPINA4P29622 427 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 SOX6P35712 828 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 SPIBQ01892 262 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 IRF8Q02556 426 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.13□□□□□ -0.63
SNX25-205ENST00000512853 PCDH1Q08174 1060 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 ACSM2AQ08AH3 577 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 ST3GAL4Q11206 333 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 MICAQ29983 383 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 CPTPQ5TA50 214 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 ACSM2BQ68CK6 577 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 Q6ZNB5 142 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 ATCAYQ86WG3 371 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 NLGN4XQ8N0W4 816 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 CELF2-AS1Q8N7Q2 184 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 SPPL2AQ8TCT8 520 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 TP53INP1Q96A56 240 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 VOPP1Q96AW1 172 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 P2RY13Q9BPV8 354 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 CHCHD6Q9BRQ6 235 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 CCM2Q9BSQ5 444 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 EMILIN2Q9BXX0 1053 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 NUAK2Q9H093 628 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 TPK1Q9H3S4 243 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 BRF2Q9HAW0 419 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 AMBNQ9NP70 447 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 RLIMQ9NVW2 624 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 ZNF282Q9UDV7 671 aaPredicted RBP11.13□□□□□ -0.63
SNX25-205ENST00000512853 DUSP12Q9UNI6 340 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 CAB39Q9Y376 341 aaPredicted RBP11.13□□□□□ -0.63
SNX25-205ENST00000512853 OBSL1O75147 1896 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 SH3D21A4FU49 640 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 GABRR3A8MPY1 467 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 H0YIV9 168 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 RNASET2O00584 256 aaKnown RBP11.13□□□□□ -0.63
SNX25-205ENST00000512853 ZW10O43264 779 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 TNFRSF21O75509 655 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 ZNF821O75541 412 aaPredicted RBP11.13□□□□□ -0.63
SNX25-205ENST00000512853 GALTP07902 379 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 HLA-EP13747 358 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 IDSP22304 550 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 LIMS1P48059 325 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 IDH2P48735 452 aaKnown RBP11.13□□□□□ -0.63
SNX25-205ENST00000512853 NKX2-5P52952 324 aaPredicted RBP11.13□□□□□ -0.63
SNX25-205ENST00000512853 MVDP53602 400 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 SMAD3P84022 425 aaKnown RBP11.13□□□□□ -0.63
SNX25-205ENST00000512853 RBBP4Q09028 425 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 HSPA14Q0VDF9 509 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 PLD1Q13393 1074 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 EXOC3L2Q2M3D2 409 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 SPANXN2Q5MJ10 180 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.13□□□□□ -0.63
SNX25-205ENST00000512853 LRRC66Q68CR7 880 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 METTL3Q86U44 580 aaKnown RBP11.13□□□□□ -0.63
SNX25-205ENST00000512853 NAGSQ8N159 534 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 CYP4Z2PQ8N1L4 340 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 VPS37AQ8NEZ2 397 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 GOT1L1Q8NHS2 421 aaPredicted RBP11.13□□□□□ -0.63
SNX25-205ENST00000512853 CDC26Q8NHZ8 85 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 SETD6Q8TBK2 473 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 ADAMTS19Q8TE59 1207 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 MAL2Q969L2 176 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 CXorf40BQ96DE9 158 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 MCCC1Q96RQ3 725 aaPredicted RBP11.13□□□□□ -0.63
SNX25-205ENST00000512853 NIPSNAP1Q9BPW8 284 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 TAPBPLQ9BX59 468 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 OR2B2Q9GZK3 357 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 TP63Q9H3D4 680 aaPredicted RBP11.13□□□□□ -0.63
SNX25-205ENST00000512853 NMRK2Q9NPI5 230 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 EHD3Q9NZN3 535 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 SPATA7Q9P0W8 599 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 TMPRSS11EQ9UL52 423 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 GABRQQ9UN88 632 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 GRIP1Q9Y3R0 1128 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 BACE2Q9Y5Z0 518 aa11.13□□□□□ -0.63
SNX25-205ENST00000512853 CASP8AP2Q9UKL3 1982 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 ARRDC5A6NEK1 342 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 PRAMEF25A6NGN4 478 aa11.12□□□□□ -0.63
SNX25-205ENST00000512853 UPK3BL1B0FP48 263 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms