RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 PRUNE1Q86TP1 453 aa4.49□□□□□ -1.69
CHD1-209ENST00000512844 P2RY8Q86VZ1 359 aa4.49□□□□□ -1.69
CHD1-209ENST00000512844 METTL23Q86XA0 190 aa4.49□□□□□ -1.69
CHD1-209ENST00000512844 HSCBQ8IWL3 235 aa4.49□□□□□ -1.69
CHD1-209ENST00000512844 CCDC185Q8N715 623 aa4.49□□□□□ -1.69
CHD1-209ENST00000512844 NKAIN3Q8N8D7 197 aa4.49□□□□□ -1.69
CHD1-209ENST00000512844 HEXDCQ8WVB3 486 aa4.49□□□□□ -1.69
CHD1-209ENST00000512844 RSPH1Q8WYR4 309 aa4.49□□□□□ -1.69
CHD1-209ENST00000512844 RAD54LQ92698 747 aa4.49□□□□□ -1.69
CHD1-209ENST00000512844 SPATA17Q96L03 361 aa4.49□□□□□ -1.69
CHD1-209ENST00000512844 PRICKLE1Q96MT3 831 aaPredicted RBP4.49□□□□□ -1.69
CHD1-209ENST00000512844 FBXL4Q9UKA2 621 aa4.49□□□□□ -1.69
CHD1-209ENST00000512844 AGTPBP1Q9UPW5 1226 aa4.49□□□□□ -1.69
CHD1-209ENST00000512844 TRAV18A0A075B6X5 111 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 TCP10L2B9ZVM9 353 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 E5RGE8 158 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 FLRT2O43155 660 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 PPIP5K2O43314 1243 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 GBAP04062 536 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 ACADSP16219 412 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 AOC1P19801 751 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 OAS2P29728 719 aaKnown RBP4.48□□□□□ -1.69
CHD1-209ENST00000512844 NAGLUP54802 743 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 DUSP5Q16690 384 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 TWISTNBQ3B726 338 aaPredicted RBP4.48□□□□□ -1.69
CHD1-209ENST00000512844 FAM106AQ4KMX7 169 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 CDHR3Q6ZTQ4 885 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 ZFAND4Q86XD8 727 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 OR10G7Q8NGN6 311 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 RPLP0P6Q8NHW5 317 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 LRRC15Q8TF66 581 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 RASL10AQ92737 203 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 TAF15Q92804 592 aaKnown RBP eCLIP4.48□□□□□ -1.69
CHD1-209ENST00000512844 CNRIP1Q96F85 164 aaPredicted RBP4.48□□□□□ -1.69
CHD1-209ENST00000512844 ARGLU1Q9NWB6 273 aaPredicted RBP4.48□□□□□ -1.69
CHD1-209ENST00000512844 TMOD3Q9NYL9 352 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 GMEB2Q9UKD1 530 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 PILRBQ9UKJ0 227 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 NCKAP1Q9Y2A7 1128 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 NSG2Q9Y328 171 aa4.48□□□□□ -1.69
CHD1-209ENST00000512844 A0A087WZ39 114 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 hCG_38984A0A1B0GV85 526 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 MTRF1O75570 445 aaKnown RBP4.47□□□□□ -1.69
CHD1-209ENST00000512844 MOCS2O96007 188 aaPredicted RBP4.47□□□□□ -1.69
CHD1-209ENST00000512844 RPLP0P05388 317 aaKnown RBP4.47□□□□□ -1.69
CHD1-209ENST00000512844 TCF4P15884 667 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 GIFP27352 417 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 SOAT1P35610 550 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 PRKCIP41743 596 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 OR3A3P47888 321 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 CDX1P47902 265 aaPredicted RBP4.47□□□□□ -1.69
CHD1-209ENST00000512844 SCN1BQ07699 218 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 TFCP2Q12800 502 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 SMC1AQ14683 1233 aaKnown RBP4.47□□□□□ -1.69
CHD1-209ENST00000512844 SNAI3Q3KNW1 292 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 ARMC3Q5W041 872 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 CPEB2Q7Z5Q1 589 aaKnown RBP4.47□□□□□ -1.69
CHD1-209ENST00000512844 OR52B6Q8NGF0 335 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 NCOA7Q8NI08 942 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 MIPOL1Q8TD10 442 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 NPRL2Q8WTW4 380 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 NXPE2Q96DL1 559 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 VMP1Q96GC9 406 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 RBM41Q96IZ5 413 aaKnown RBP4.47□□□□□ -1.69
CHD1-209ENST00000512844 NEDD4LQ96PU5 975 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 OVOL2Q9BRP0 275 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 DPEP2Q9H4A9 486 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 C10orf88Q9H8K7 445 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 C3orf14Q9HBI5 128 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 POMT2Q9UKY4 750 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 PLCL2Q9UPR0 1127 aa4.47□□□□□ -1.69
CHD1-209ENST00000512844 COL2A1P02458 1487 aaPredicted RBP4.46□□□□□ -1.7
CHD1-209ENST00000512844 IGHV3OR16-10A0A075B7F0 116 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 GTPBP10A4D1E9 387 aaKnown RBP4.46□□□□□ -1.7
CHD1-209ENST00000512844 NKX6-3A6NJ46 265 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 A8MXK9 166 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 NPIPA3F8WFD2 350 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 K7EQD1 137 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 PRAF2O60831 178 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 SAP30O75446 220 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 SHC1P29353 583 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 GPR183P32249 361 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 GP5P40197 560 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 ERVK-16P61578 105 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 WASHC5Q12768 1159 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 TRA2AQ13595 282 aaKnown RBP eCLIP4.46□□□□□ -1.7
CHD1-209ENST00000512844 PPA1Q15181 289 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 CDO1Q16878 200 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 ZNF542PQ5EBM4 170 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 FAM46CQ5VWP2 391 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 SUSD4Q5VX71 490 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 FAM166AQ6J272 317 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 GDPGP1Q6ZNW5 385 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 GPR141Q7Z602 305 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 PRSS33Q8NF86 280 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 CCDC47Q96A33 483 aaKnown RBP4.46□□□□□ -1.7
CHD1-209ENST00000512844 BSCL2Q96G97 398 aaPredicted RBP4.46□□□□□ -1.7
CHD1-209ENST00000512844 PSMB7Q99436 277 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 PI4K2AQ9BTU6 479 aa4.46□□□□□ -1.7
CHD1-209ENST00000512844 EDEM3Q9BZQ6 932 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms