RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 SIAH3Q8IW03 269 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 CNTN4Q8IWV2 1026 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 UNC45BQ8IWX7 931 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 ZC3H3Q8IXZ2 948 aaKnown RBP2.78□□□□□ -1.96
CHD1-207ENST00000511628 C4orf19Q8IY42 314 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 RCOR2Q8IZ40 523 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 C10orf53Q8N6V4 93 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 OR7A2PQ8NGA2 310 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 OR1L3Q8NH93 324 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 ZNF689Q96CS4 500 aaPredicted RBP2.78□□□□□ -1.96
CHD1-207ENST00000511628 POM121L2Q96KW2 1035 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 C10orf90Q96M02 699 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 AGAP3Q96P47 875 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 NEDD4LQ96PU5 975 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 RASL10BQ96S79 203 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 ALKBH7Q9BT30 221 aaPredicted RBP2.78□□□□□ -1.96
CHD1-207ENST00000511628 MRPL9Q9BYD2 267 aaKnown RBP2.78□□□□□ -1.96
CHD1-207ENST00000511628 OSBPL8Q9BZF1 889 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 SLC39A8Q9C0K1 460 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 EGLN3Q9H6Z9 239 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 CHST11Q9NPF2 352 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 PNPLA3Q9NST1 481 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 BARHL2Q9NY43 387 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 FLRT3Q9NZU0 649 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 FBXL5Q9UKA1 691 aa2.78□□□□□ -1.96
CHD1-207ENST00000511628 CACNA1FO60840 1977 aa2.78□□□□□ -1.97
CHD1-207ENST00000511628 KIAA1217Q5T5P2 1943 aa2.78□□□□□ -1.97
CHD1-207ENST00000511628 TRAV18A0A075B6X5 111 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 A0A087WW49 117 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 E5RGE8 158 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 GLRA3O75311 464 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 CDC123O75794 336 aaPredicted RBP2.77□□□□□ -1.97
CHD1-207ENST00000511628 CDK2AP2O75956 126 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 TRIM49P0CI25 452 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 TRIM49CP0CI26 452 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 VCLP18206 1134 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 TYMPP19971 482 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 CYP2A7P20853 494 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 SRD5A2P31213 254 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 SFTPDP35247 375 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 CASP3P42574 277 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 IER3P46695 156 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 OR1D5P58170 312 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 OPCMLQ14982 345 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 SGCBQ16585 318 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 ZNF542PQ5EBM4 170 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.77□□□□□ -1.97
CHD1-207ENST00000511628 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 FUT10Q6P4F1 479 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 METTL7BQ6UX53 244 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 G2E3Q7L622 706 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 PRUNE1Q86TP1 453 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 DCLK2Q8N568 766 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 SPC24Q8NBT2 197 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 SLC37A3Q8NCC5 494 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 ST7LQ8TDW4 575 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 APOBEC4Q8WW27 367 aaKnown RBP2.77□□□□□ -1.97
CHD1-207ENST00000511628 TAF15Q92804 592 aaKnown RBP eCLIP2.77□□□□□ -1.97
CHD1-207ENST00000511628 BCL2L2Q92843 193 aaPredicted RBP2.77□□□□□ -1.97
CHD1-207ENST00000511628 FAM46BQ96A09 425 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 AP2M1Q96CW1 435 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 TSSK2Q96PF2 358 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 ATOH8Q96SQ7 321 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 PRMT1Q99873 361 aaKnown RBP2.77□□□□□ -1.97
CHD1-207ENST00000511628 ACAT2Q9BWD1 397 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 MID1IP1Q9NPA3 183 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 PLCXD1Q9NUJ7 323 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 DNAJC11Q9NVH1 559 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 TMEM161AQ9NX61 479 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 NSG2Q9Y328 171 aa2.77□□□□□ -1.97
CHD1-207ENST00000511628 COL2A1P02458 1487 aaPredicted RBP2.77□□□□□ -1.97
CHD1-207ENST00000511628 SPATA31D1Q6ZQQ2 1576 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 IGLV7-46A0A075B6I9 117 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 TRBV4-1A0A0J9YWV2 114 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 NPIPA3F8WFD2 350 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 RTCAO00442 366 aaKnown RBP2.76□□□□□ -1.97
CHD1-207ENST00000511628 MLNRO43193 412 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 VEGFDO43915 354 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 KIF5CO60282 957 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 ATP9AO75110 1047 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 RTN2O75298 545 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 CRLF1O75462 422 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 SEC24AO95486 1093 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 OLFM2O95897 454 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 SBK2P0C263 348 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 C8orf89P0DMQ9 161 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 CTNNB1P35222 781 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 MAGEA11P43364 429 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 SERPINH1P50454 418 aaKnown RBP2.76□□□□□ -1.97
CHD1-207ENST00000511628 KIAA1024LP59773 190 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 CSNK2BP67870 215 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 FKBP1BP68106 108 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 AKAP17AQ02040 695 aaKnown RBP2.76□□□□□ -1.97
CHD1-207ENST00000511628 UBXN1Q04323 297 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 RPA4Q13156 261 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 RPS6KA1Q15418 735 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 ZNF74Q16587 644 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 AARDQ4LEZ3 155 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 PDLIM3Q53GG5 364 aaPredicted RBP2.76□□□□□ -1.97
CHD1-207ENST00000511628 ODF2Q5BJF6 829 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms