RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MAPK14Q16539 360 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 NUDT13Q86X67 352 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 ZNF584Q8IVC4 421 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.13□□□□□ -1.11
HTT-208ENST00000510626 SPPL2BQ8TCT7 592 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 TXN2Q99757 166 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 RSPH9Q9H1X1 276 aaPredicted RBP8.13□□□□□ -1.11
HTT-208ENST00000510626 MS4A12Q9NXJ0 267 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 CAPN14A8MX76 684 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 H7C417 338 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 FLRT2O43155 660 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 MAOAP21397 527 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 NFATC3Q12968 1075 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 TSTQ16762 297 aaKnown RBP8.13□□□□□ -1.11
HTT-208ENST00000510626 UGT2A3Q6UWM9 527 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 DNAJC22Q8N4W6 341 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 COPS5Q92905 334 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.13□□□□□ -1.11
HTT-208ENST00000510626 YDJCA8MPS7 323 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 PHYHO14832 338 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 ENGP17813 658 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 PDHA2P29803 388 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 NLRP8Q86W28 1048 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 C12orf40Q86WS4 652 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 SYNPOQ8N3V7 929 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 C1orf52Q8N6N3 182 aaKnown RBP8.13□□□□□ -1.11
HTT-208ENST00000510626 WDR18Q9BV38 432 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 TNKS2Q9H2K2 1166 aa8.13□□□□□ -1.11
HTT-208ENST00000510626 MEGF11A6BM72 1044 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 ADH1AP07327 375 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 DSTNP60981 165 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 GLT8D1Q68CQ7 371 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 ZNF627Q7L945 461 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 IL31RAQ8NI17 732 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 SCGB1C1Q8TD33 95 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 ADAM2Q99965 735 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 STK25O00506 426 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 YKT6O15498 198 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 ARF4P18085 180 aaPredicted RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 CAPN3P20807 821 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 AQP1P29972 269 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 LCN8Q6JVE9 175 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 ZC3H3Q8IXZ2 948 aaKnown RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 C2CD4AQ8NCU7 369 aaPredicted RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 MAPK15Q8TD08 544 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 GNPDA2Q8TDQ7 276 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 CDT1Q9H211 546 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 IRAK2O43187 625 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 FOSL2P15408 326 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 ZNF155Q12901 538 aaPredicted RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 ATAT1Q5SQI0 421 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 GATAD2BQ8WXI9 593 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 SEMA4CQ9C0C4 833 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 LIPT1Q9Y234 373 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 TBL1XO60907 577 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 AKR1A1P14550 325 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 SLC6A6P31641 620 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 GK2Q14410 553 aaPredicted RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 TRAM2Q15035 370 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 ARHGAP12Q8IWW6 846 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 PCDHB9Q9Y5E1 797 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 hCG_2039718K7EN88 272 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 UCHL1P09936 223 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 EFNA1P20827 205 aaPredicted RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 LHCGRP22888 699 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 MLLT3P42568 568 aaPredicted RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 FRG2Q64ET8 278 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 SLC30A10Q6XR72 485 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 BEST3Q8N1M1 668 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 LFNGQ8NES3 379 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 C16orf58Q96GQ5 468 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 FRG2BQ96QU4 278 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 TMEM106CQ9BVX2 250 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 FFAR2O15552 330 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 EBLN1P0CF75 366 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 GRSF1Q12849 480 aaKnown RBP eCLIP8.12□□□□□ -1.11
HTT-208ENST00000510626 TOMM20Q15388 145 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 SEZ6Q53EL9 994 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 TMEM205Q6UW68 189 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 CHST9Q7L1S5 443 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 PACSIN3Q9UKS6 424 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 MED31Q9Y3C7 131 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 CKMT2P17540 419 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 CHRNB2P17787 502 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 UQCRC2P22695 453 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 NFKB2Q00653 900 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 PFKPQ01813 784 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 BCL2A1Q16548 175 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 SMARCD3Q6STE5 483 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 LINC00116Q8NCU8 138 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 FUBP3Q96I24 572 aaKnown RBP eCLIP8.12□□□□□ -1.11
HTT-208ENST00000510626 ACBD6Q9BR61 282 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 CHRAC1Q9NRG0 131 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 NOP16Q9Y3C1 178 aaKnown RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 BCL9LQ86UU0 1499 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 ANKRD33BA6NCL7 494 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 RAB4AP20338 218 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 LASP1Q14847 261 aaKnown RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 MYLK3Q32MK0 819 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 GPAT4Q86UL3 456 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms