RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 PTBP3O95758 552 aaKnown RBP3.53□□□□□ -1.84
CAST-229ENST00000510098 AK1P00568 194 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 SERPING1P05155 500 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 HAPLN1P10915 354 aaPredicted RBP3.53□□□□□ -1.84
CAST-229ENST00000510098 CYP11B2P19099 503 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 CD22P20273 847 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 TMOD1P28289 359 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 TIA1P31483 386 aaKnown RBP eCLIP3.53□□□□□ -1.841e-7■■■□□ 15.9
CAST-229ENST00000510098 SOX6P35712 828 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 CHRNA7P36544 502 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 PITPNBP48739 271 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 LHX1P48742 406 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 LINC01547P58512 204 aaPredicted RBP3.53□□□□□ -1.84
CAST-229ENST00000510098 CCNA1P78396 465 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 ZNF415Q09FC8 603 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 CUL3Q13618 768 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 KARSQ15046 597 aaKnown RBP3.53□□□□□ -1.84
CAST-229ENST00000510098 MAPK11Q15759 364 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 ODF4Q2M2E3 257 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 IQCCQ4KMZ1 466 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.53□□□□□ -1.84
CAST-229ENST00000510098 KLHL10Q6JEL2 608 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 NOTUMQ6P988 496 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 OTUD6AQ7L8S5 288 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 SYVN1Q86TM6 617 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 TRPT1Q86TN4 253 aaKnown RBP3.53□□□□□ -1.84
CAST-229ENST00000510098 UNC5CLQ8IV45 518 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 SERPINA12Q8IW75 414 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 ZNF383Q8NA42 475 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 THAP8Q8NA92 274 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 CCNYQ8ND76 341 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 OR11H4Q8NGC9 324 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 OR52E1Q8NGJ3 308 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 GRHL3Q8TE85 626 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 RNF139Q8WU17 664 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 FCAMRQ8WWV6 532 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 C14orf79Q96F83 325 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 ZNF560Q96MR9 790 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 SPATA13Q96N96 652 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 MUS81Q96NY9 551 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 FEVQ99581 238 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 TBCDQ9BTW9 1192 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 CARD6Q9BX69 1037 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 PRRG4Q9BZD6 226 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 FN3KQ9H479 309 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 SRD5A3Q9H8P0 318 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 LMAN1LQ9HAT1 526 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 GPN1Q9HCN4 374 aaPredicted RBP3.53□□□□□ -1.84
CAST-229ENST00000510098 TM9SF3Q9HD45 589 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 P4HTMQ9NXG6 502 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 TBC1D7Q9P0N9 293 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 TSPAN16Q9UKR8 245 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 TMED5Q9Y3A6 229 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 TMED3Q9Y3Q3 217 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 C2CD2Q9Y426 696 aa3.53□□□□□ -1.84
CAST-229ENST00000510098 WDR81Q562E7 1941 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 IGLV9-49A0A0B4J1Y8 123 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 LOC101059948A0A1B0GTJ6 334 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 C2orf92A0A1B0GVN3 265 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 A0A1B0GWJ7 208 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 C5orf51A6NDU8 294 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 ERICH4A6NGS2 130 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 E2F3O00716 465 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 PTGESO14684 152 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 AP5Z1O43299 807 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 SPAG6O75602 509 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 PRDM1O75626 825 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 PGLSO95336 258 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 KRT6BP04259 564 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 SBK2P0C263 348 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 SAGP10523 405 aaPredicted RBP3.52□□□□□ -1.85
CAST-229ENST00000510098 EFNA1P20827 205 aaPredicted RBP3.52□□□□□ -1.85
CAST-229ENST00000510098 CA4P22748 312 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 ACP1P24666 158 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 ACAT1P24752 427 aaKnown RBP3.52□□□□□ -1.85
CAST-229ENST00000510098 DNAJB1P25685 340 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 CCND3P30281 292 aaPredicted RBP3.52□□□□□ -1.85
CAST-229ENST00000510098 SERPINB6P35237 376 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 KRT6CP48668 564 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 SERPINH1P50454 418 aaKnown RBP3.52□□□□□ -1.85
CAST-229ENST00000510098 PTENP60484 403 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 POLR2LP62875 67 aaKnown RBP3.52□□□□□ -1.85
CAST-229ENST00000510098 MAT1AQ00266 395 aaKnown RBP3.52□□□□□ -1.85
CAST-229ENST00000510098 BEX3Q00994 111 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 PMP22Q01453 160 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 CHIT1Q13231 466 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 SNX1Q13596 522 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 VEZF1Q14119 521 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 CA9Q16790 459 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 MCMDC2Q4G0Z9 681 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 HERC4Q5GLZ8 1057 aaPredicted RBP3.52□□□□□ -1.85
CAST-229ENST00000510098 PRAMEF8Q5VWM4 474 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 TXNRD3NBQ6F5E7 133 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 RAET1GQ6H3X3 334 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 C1orf186Q6ZWK4 172 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 ARMCX2Q7L311 632 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 PRSS42Q7Z5A4 293 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 PHLDB2Q86SQ0 1253 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 NUDT13Q86X67 352 aa3.52□□□□□ -1.85
CAST-229ENST00000510098 FAM219AQ8IW50 185 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms