RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 USH1CQ9Y6N9 552 aa15.46■□□□□ 0.07
NDFIP1-204ENST00000509436 CELSR1Q9NYQ6 3014 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 IGHV1OR21-1A0A087WYE8 117 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 A0A0J9YY10 115 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 TRPC5OSA6NMA1 111 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 TMEM233B4DJY2 109 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 HDAC3O15379 428 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 IFT88Q13099 833 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 KCNAB2Q13303 367 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 E2F2Q14209 437 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 SLBPQ14493 270 aaKnown RBP eCLIP15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 IRGCQ6NXR0 463 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 MED27Q6P2C8 311 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 GUSBP11Q6P575 273 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 Q8N9G6 341 aaPredicted RBP15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 TWIST2Q8WVJ9 160 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 ZDHHC12Q96GR4 267 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 PHF12Q96QT6 1004 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 KCNA7Q96RP8 456 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 CCT8L2Q96SF2 557 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 CCT7Q99832 543 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 ELAC2Q9BQ52 826 aaKnown RBP15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 RAB33BQ9H082 229 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 ELOVL6Q9H5J4 265 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 RABEP2Q9H5N1 569 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 TNFRSF12AQ9NP84 129 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 WDR70Q9NW82 654 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 CUEDC1Q9NWM3 386 aaPredicted RBP15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 KLHL14Q9P2G3 628 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 EPHA6Q9UF33 1036 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 POMT2Q9UKY4 750 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 TIMM22Q9Y584 194 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 PCDHGA11Q9Y5H2 935 aa15.45■□□□□ 0.06
NDFIP1-204ENST00000509436 KCNE1BA0A087WTH5 132 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 H0YIV9 168 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 H7BY64 318 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 PRAMEF4O60810 478 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 ULK1O75385 1050 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 SKAP2O75563 359 aaPredicted RBP15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 CDH3P22223 829 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 FOXA1P55317 472 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 PHEXP78562 749 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 REEP5Q00765 189 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 ZRSR2Q15696 482 aaKnown RBP15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 PDCD2Q16342 344 aaPredicted RBP15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 AMZ1Q400G9 498 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 MANEAQ5SRI9 462 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 C10orf62Q5T681 223 aaPredicted RBP15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 PRAMEF9Q5VWM5 478 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 SPATA21Q7Z572 469 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 SPRED1Q7Z699 444 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 PLXDC1Q8IUK5 500 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 ZSCAN1Q8NBB4 408 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 OR4K1Q8NGD4 311 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 FLVCR1-AS1Q8TAF5 88 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 NCSTNQ92542 709 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 ZUFSPQ96AP4 578 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 THOC1Q96FV9 657 aaKnown RBP15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 PRAP1Q96NZ9 151 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 CD180Q99467 661 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 DPH7Q9BTV6 452 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 NT5DC2Q9H857 520 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 SLC6A20Q9NP91 592 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 PDZD2O15018 2839 aa15.44■□□□□ 0.06
NDFIP1-204ENST00000509436 MANBAO00462 879 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 FFAR3O14843 346 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 PLD2O14939 933 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 CASC3O15234 703 aaKnown RBP15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 CAPN5O15484 640 aaPredicted RBP15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 GPR42O15529 346 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 PCNAP12004 261 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 ALOX15P16050 662 aaPredicted RBP15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 CD22P20273 847 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 SERPINB3P29508 390 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 GRIA3P42263 894 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 AQP5P55064 265 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 POLE2P56282 527 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 CSNK1G2P78368 415 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 ZNF33BQ06732 778 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 KRTAP21-3Q3LHN1 58 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 UGT3A2Q3SY77 523 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 GKAP1Q5VSY0 366 aaPredicted RBP15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 NKAIN2Q5VXU1 208 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 FRG2Q64ET8 278 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 CGB2Q6NT52 195 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 BORAQ6PGQ7 559 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 RNF165Q6ZSG1 346 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 TRIM73Q86UV7 250 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 VASH2Q86V25 355 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 FAM129CQ86XR2 697 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 FAM20CQ8IXL6 584 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 DDIASQ8IXT1 998 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 BCAS4Q8TDM0 211 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 SELENOMQ8WWX9 145 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 FRG2BQ96QU4 278 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 DPYSL5Q9BPU6 564 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 CCDC3Q9BQI4 270 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 PLCD4Q9BRC7 762 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 NUF2Q9BZD4 464 aa15.43■□□□□ 0.06
NDFIP1-204ENST00000509436 SEMA6CQ9H3T2 930 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms