RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 MTBPQ96DY7 904 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 VPS50Q96JG6 964 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 PRAP1Q96NZ9 151 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 OR2A5Q96R48 311 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 PCBD2Q9H0N5 130 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 SOX17Q9H6I2 414 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 NMRAL1Q9HBL8 299 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 P4HTMQ9NXG6 502 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 GPR83Q9NYM4 423 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 NUDT4Q9NZJ9 180 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 MAP10Q9P2G4 905 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 NXT1Q9UKK6 140 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 GRID1Q9ULK0 1009 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 RNF112Q9ULX5 631 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 CDC14AQ9UNH5 594 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 SCN2AQ99250 2005 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 KCNE1BA0A087WTH5 132 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 FITM1A5D6W6 292 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 E2F3O00716 465 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 OR7A17O14581 309 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 PRPF4O43172 522 aaKnown RBP eCLIP8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 KLHL41O60662 606 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 PLIN3O60664 434 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 CNOT3O75175 753 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 DNAJB6O75190 326 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 WDR47O94967 919 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 B3GALT4O96024 378 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 ALBP02768 609 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 PDGFAP04085 211 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 ALPPP05187 535 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 RPS17P08708 135 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 EZRP15311 586 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 KRT4P19013 534 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 TSPAN8P19075 237 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 CCND1P24385 295 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 HRH2P25021 359 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 ITGA3P26006 1051 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 GRK3P35626 688 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 ETV4P43268 484 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 HYAL2Q12891 473 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 E2F2Q14209 437 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 IGFBP7Q16270 282 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 NKG7Q16617 165 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 NDUFA9Q16795 377 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 PFKFB4Q16877 469 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 HKDC1Q2TB90 917 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 KRT71Q3SY84 523 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 CEP85LQ5SZL2 805 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 SULT1C3Q6IMI6 304 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 CAPN13Q6MZZ7 669 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 SLCO4C1Q6ZQN7 724 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 SRRM1Q8IYB3 904 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 EFCAB3Q8N7B9 438 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 AMER2Q8N7J2 671 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 PTGR2Q8N8N7 351 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 FDCSPQ8NFU4 85 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 ABHD11Q8NFV4 315 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 STAG3L4Q8TBR4 150 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 ACMSDQ8TDX5 336 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 MIEF2Q96C03 454 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 PHF21BQ96EK2 531 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 MMABQ96EY8 250 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 C10orf90Q96M02 699 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 TMEM237Q96Q45 408 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 EGFL8Q99944 293 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 CRB3Q9BUF7 120 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 MFRPQ9BY79 579 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 CD244Q9BZW8 370 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 ROPN1BQ9BZX4 212 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 WDR54Q9H977 334 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 ROPN1Q9HAT0 212 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 ATP13A2Q9NQ11 1180 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 SLAMF7Q9NQ25 335 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 ENAMQ9NRM1 1142 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 SLC22A11Q9NSA0 550 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 MKS1Q9NXB0 559 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 TRPC4Q9UBN4 977 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 CTSFQ9UBX1 484 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 ZNF282Q9UDV7 671 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 PCTPQ9UKL6 214 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 PCDHGA9Q9Y5G4 932 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 IKBKGQ9Y6K9 419 aa8.31□□□□□ -1.08
PDLIM5-213ENST00000509357 NUP210LQ5VU65 1888 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 SEC16AO15027 2179 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 UBFD1O14562 309 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 DPM1O60762 260 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 UMODP07911 640 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 UQCRHP07919 91 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 COL6A2P12110 1019 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 KRT15P19012 456 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 MMP11P24347 488 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 CXCR2P25025 360 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 CRHR1P34998 444 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 AVPR1BP47901 424 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 MLLT10P55197 1068 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 REEP5Q00765 189 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 ILF2Q12905 390 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 PCLAFQ15004 111 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 PCBP2Q15366 365 aaKnown RBP eCLIP8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 FAM83EQ2M2I3 478 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms