RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 PPP1R21Q6ZMI0 780 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 VN1R4Q7Z5H5 301 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 PLD3Q8IV08 490 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 CCDC71Q8IV32 467 aaPredicted RBP8.8□□□□□ -1
NEDD9-211ENST00000508546 VSTM4Q8IW00 320 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 RPRMLQ8N4K4 120 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 ZFP62Q8NB50 900 aaPredicted RBP8.8□□□□□ -1
NEDD9-211ENST00000508546 FBXO15Q8NCQ5 510 aaPredicted RBP8.8□□□□□ -1
NEDD9-211ENST00000508546 WFDC11Q8NEX6 87 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 SLC35B2Q8TB61 432 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 ALG3Q92685 438 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 THAP11Q96EK4 314 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 CALR3Q96L12 384 aaKnown RBP8.8□□□□□ -1
NEDD9-211ENST00000508546 BIRC8Q96P09 236 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 PANX2Q96RD6 677 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 ETNK1Q9HBU6 452 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 LANCL2Q9NS86 450 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 ZNF358Q9NW07 568 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 EDARQ9UNE0 448 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 L3MBTL1Q9Y468 752 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 FREM3P0C091 2139 aa8.8□□□□□ -1
NEDD9-211ENST00000508546 H3BMM5 538 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 H7BY64 318 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 SGK494L7N484 410 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 SMAPO00193 183 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 HS6ST1O60243 411 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 CDC40O60508 579 aaKnown RBP eCLIP8.79□□□□□ -1
NEDD9-211ENST00000508546 DNASE1P24855 282 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 STIP1P31948 543 aaKnown RBP8.79□□□□□ -1
NEDD9-211ENST00000508546 FDFT1P37268 417 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 GRIA1P42261 906 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 ITGA8P53708 1063 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 ADARP55265 1226 aaKnown RBP8.79□□□□□ -1
NEDD9-211ENST00000508546 NUP107P57740 925 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 OR4D2P58180 307 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 PMPCAQ10713 525 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 KLF1Q13351 362 aaPredicted RBP8.79□□□□□ -1
NEDD9-211ENST00000508546 KLHL38Q2WGJ6 581 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 CTSL3PQ5NE16 218 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 ADCK2Q7Z695 626 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 CNGA4Q8IV77 575 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 SULF2Q8IWU5 870 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 LRRC56Q8IYG6 542 aaPredicted RBP8.79□□□□□ -1
NEDD9-211ENST00000508546 KIF2BQ8N4N8 673 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 CAMKVQ8NCB2 501 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 PPFIBP2Q8ND30 876 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 PPHLN1Q8NEY8 458 aaKnown RBP8.79□□□□□ -1
NEDD9-211ENST00000508546 ZNF480Q8WV37 535 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 MBD6Q96DN6 1003 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 TM4SF19Q96DZ7 209 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 C18orf12Q96KH6 178 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 PRAP1Q96NZ9 151 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 PKP4Q99569 1192 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 POLDIP3Q9BY77 421 aaKnown RBP8.79□□□□□ -1
NEDD9-211ENST00000508546 FAM129AQ9BZQ8 928 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 LIME1Q9H400 295 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 ANKHQ9HCJ1 492 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 TREX1Q9NSU2 369 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 TMEM184CQ9NVA4 438 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 TFR2Q9UP52 801 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 PCDHA13Q9Y5I0 950 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 SLC22A7Q9Y694 548 aa8.79□□□□□ -1
NEDD9-211ENST00000508546 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.79□□□□□ -1
NEDD9-211ENST00000508546 HIVEP2P31629 2446 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 FCHO1O14526 889 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 PROM1O43490 865 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 PEX1O43933 1283 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 NIPSNAP2O75323 286 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 RDH16O75452 317 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 CDC123O75794 336 aaPredicted RBP8.78□□□□□ -1
NEDD9-211ENST00000508546 STATHP02808 62 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 ESR1P03372 595 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 INHBBP09529 407 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 ADSLP30566 484 aaPredicted RBP8.78□□□□□ -1
NEDD9-211ENST00000508546 DLX5P56178 289 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 MEF2AQ02078 507 aaPredicted RBP8.78□□□□□ -1
NEDD9-211ENST00000508546 TYSND1Q2T9J0 566 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 ACSBG2Q5FVE4 666 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 PCID2Q5JVF3 399 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 RNF187Q5TA31 235 aaPredicted RBP8.78□□□□□ -1
NEDD9-211ENST00000508546 MEI1Q5TIA1 1274 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 PAOXQ6QHF9 649 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 CAMKMTQ7Z624 323 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 PDSS2Q86YH6 399 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 PHC2Q8IXK0 858 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 OR52N2Q8NGI0 321 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 LPGAT1Q92604 370 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 TSLPQ969D9 159 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 RMND5BQ96G75 393 aaPredicted RBP8.78□□□□□ -1
NEDD9-211ENST00000508546 PEX11GQ96HA9 241 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 TCF12Q99081 682 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 SLC6A16Q9GZN6 736 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 CHRAC1Q9NRG0 131 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 RASSF1Q9NS23 344 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 TSR3Q9UJK0 312 aaKnown RBP8.78□□□□□ -1
NEDD9-211ENST00000508546 ZKSCAN5Q9Y2L8 839 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 ARID1AO14497 2285 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 ANK2Q01484 3957 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 CUBNO60494 3623 aa8.78□□□□□ -1
NEDD9-211ENST00000508546 FEZF1A0PJY2 475 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms