RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 PCDHGA3Q9Y5H0 932 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 SPEGQ15772 3267 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 NUP210LQ5VU65 1888 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 PTPRZ1P23471 2315 aaPredicted RBP8.24□□□□□ -1.09
USP46-207ENST00000508499 FER1L5A0AVI2 2057 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 CCDC187A0A096LP49 1063 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 SPAARA0A1B0GVQ0 90 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 URADA6NGE7 173 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 TRPC5OSA6NMA1 111 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 H0YGG7 62 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 MANBAO00462 879 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 CASC3O15234 703 aaKnown RBP8.24□□□□□ -1.09
USP46-207ENST00000508499 OR1F1O43749 312 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 VPS4BO75351 444 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 CSO75390 466 aaKnown RBP8.24□□□□□ -1.09
USP46-207ENST00000508499 LYPLA1O75608 230 aaPredicted RBP8.24□□□□□ -1.09
USP46-207ENST00000508499 RSL1D1O76021 490 aaKnown RBP8.24□□□□□ -1.09
USP46-207ENST00000508499 SCELO95171 688 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 PRR35P0CG20 571 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 SMIM10L1P0DMW3 83 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 FOLR1P15328 257 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 TSPAN8P19075 237 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 HMOX2P30519 316 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 LSP1P33241 339 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 CCR10P46092 362 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 GSTM5P46439 218 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 ARL4DP49703 201 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 FOXA1P55317 472 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 ARF3P61204 181 aaPredicted RBP8.24□□□□□ -1.09
USP46-207ENST00000508499 STXBP1P61764 594 aaKnown RBP8.24□□□□□ -1.09
USP46-207ENST00000508499 C16orf72Q14CZ0 275 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 DEPDC1Q5TB30 811 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 HES3Q5TGS1 186 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 TMEM214Q6NUQ4 689 aaKnown RBP8.24□□□□□ -1.09
USP46-207ENST00000508499 GALNT18Q6P9A2 607 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 DHRS13Q6UX07 377 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 ADCK2Q7Z695 626 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 ASPGQ86U10 573 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 MCATQ8IVS2 390 aaKnown RBP8.24□□□□□ -1.09
USP46-207ENST00000508499 WDR75Q8IWA0 830 aaKnown RBP8.24□□□□□ -1.09
USP46-207ENST00000508499 FAM20CQ8IXL6 584 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 TWIST2Q8WVJ9 160 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 RERGQ96A58 199 aaPredicted RBP8.24□□□□□ -1.09
USP46-207ENST00000508499 CMTM7Q96FZ5 175 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 SMIM10Q96HG1 83 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 LRFN5Q96NI6 719 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 SERPINI1Q99574 410 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 DDA1Q9BW61 102 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 NLNQ9BYT8 704 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 SYNPO2LQ9H987 977 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 SLCO1B3Q9NPD5 702 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 FGF21Q9NSA1 209 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 SOHLH2Q9NX45 425 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 SERTAD3Q9UJW9 196 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 ADAM29Q9UKF5 820 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 ACSL6Q9UKU0 697 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 SRPK3Q9UPE1 567 aa8.24□□□□□ -1.09
USP46-207ENST00000508499 FEZF1A0PJY2 475 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 MAGEB17A8MXT2 336 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 TCP11X1B4DZS4 312 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 SLC28A1O00337 649 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 HCRTR1O43613 425 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 NRP2O60462 931 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 DXOO77932 396 aaKnown RBP8.23□□□□□ -1.09
USP46-207ENST00000508499 PDYNP01213 254 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 HBQ1P09105 142 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 MPSTP25325 297 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 ARSFP54793 590 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 ITGA1P56199 1179 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 SKP1P63208 163 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 MEF2AQ02078 507 aaPredicted RBP8.23□□□□□ -1.09
USP46-207ENST00000508499 RGS1Q08116 209 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 TUBB3Q13509 450 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 GRM7Q14831 915 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 ABRAXAS2Q15018 415 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 FAM214AQ32MH5 1076 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 SPIN4Q56A73 249 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 PHF19Q5T6S3 580 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 KHDRBS2Q5VWX1 349 aaKnown RBP8.23□□□□□ -1.09
USP46-207ENST00000508499 CLEC6AQ6EIG7 209 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 FRMPD2BQ6IN97 320 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 OGFOD2Q6N063 350 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 RHBDD2Q6NTF9 364 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 Q6ZSR9 355 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 CHSY3Q70JA7 882 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 RAB11FIP2Q7L804 512 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 RCBTB1Q8NDN9 531 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 OR2L5Q8NG80 312 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 WDR36Q8NI36 951 aaKnown RBP8.23□□□□□ -1.09
USP46-207ENST00000508499 SLC13A3Q8WWT9 602 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 SELENOMQ8WWX9 145 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 GAL3ST3Q96A11 431 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 C19orf60Q96EN9 201 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 CHMP6Q96FZ7 201 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 FCRL1Q96LA6 429 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 KCNA7Q96RP8 456 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 DPH2Q9BQC3 489 aaPredicted RBP8.23□□□□□ -1.09
USP46-207ENST00000508499 CENPKQ9BS16 269 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 ASPSCR1Q9BZE9 553 aa8.23□□□□□ -1.09
USP46-207ENST00000508499 TUBB1Q9H4B7 451 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms