RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 IFITM2Q01629 132 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 RHAGQ02094 409 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CHRNEQ04844 493 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ST3GAL4Q11206 333 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 TWF1Q12792 350 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ELAVL2Q12926 359 aaKnown RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 TAF10Q12962 218 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 PPIGQ13427 754 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ASAH1Q13510 395 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 C1DQ13901 141 aaKnown RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 KCNC3Q14003 757 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ARHGEF7Q14155 803 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 DMC1Q14565 340 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 DSC3Q14574 896 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CCL15Q16663 113 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 HKDC1Q2TB90 917 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 GTDC1Q4AE62 458 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CTXN3Q4LDR2 81 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 PAN2Q504Q3 1202 aaKnown RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ATAD3CQ5T2N8 411 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 C6orf183Q5T699 404 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 GPRC6AQ5T6X5 926 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF468Q5VIY5 522 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 LIPJQ5W064 366 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZDHHC20Q5W0Z9 365 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 FRG2Q64ET8 278 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ANKRD34AQ69YU3 496 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 NADSYN1Q6IA69 706 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 NCEH1Q6PIU2 408 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 C19orf48Q6RUI8 117 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CD300LGQ6UXG3 332 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 TMPRSS11AQ6ZMR5 421 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 C1orf229Q6ZS94 237 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF621Q6ZSS3 439 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 GDPD3Q7L5L3 318 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 DNAJB7Q7Z6W7 309 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 SERINC5Q86VE9 423 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 SERPINA9Q86WD7 417 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CIR1Q86X95 450 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 SNX29P2Q8IUI4 249 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 SYT12Q8IV01 421 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CLIP4Q8N3C7 705 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 SYNPOQ8N3V7 929 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 NAT16Q8N8M0 369 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 GDPD1Q8N9F7 314 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 L3MBTL4Q8NA19 623 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 FAM83FQ8NEG4 500 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 OR7D4Q8NG98 312 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 OR7G1Q8NGA0 311 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 OR10G2Q8NGC3 310 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 OR6F1Q8NGZ6 308 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ANGPTL6Q8NI99 470 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 APH1BQ8WW43 257 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 GGHQ92820 318 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 DNASE1L2Q92874 299 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 KIAA1143Q96AT1 154 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 PYCR2Q96C36 320 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 TPD52L3Q96J77 140 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 RIPOR3Q96MK2 946 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 WDFY2Q96P53 400 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 FAM193BQ96PV7 902 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 FRG2BQ96QU4 278 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 HHIPQ96QV1 700 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 HBEGFQ99075 208 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 PAAF1Q9BRP4 392 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CHCHD6Q9BRQ6 235 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 INPP5KQ9BT40 448 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 TRAF4Q9BUZ4 470 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 GON7Q9BXV9 100 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ALOXE3Q9BYJ1 711 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 TNKS2Q9H2K2 1166 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CWH43Q9H720 699 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ASB8Q9H765 288 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 SMURF1Q9HCE7 757 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 LTB4R2Q9NPC1 389 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ASAH2Q9NR71 780 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 THSD1Q9NS62 852 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 DNAJC11Q9NVH1 559 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ELOVL2Q9NXB9 296 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ARL15Q9NXU5 204 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 VNN3Q9NY84 501 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 TAS2R9Q9NYW1 312 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 IL17CQ9P0M4 197 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CACNG4Q9UBN1 327 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF282Q9UDV7 671 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLCO3A1Q9UIG8 710 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 PHF11Q9UIL8 331 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 UTS2RQ9UKP6 389 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CARD8Q9Y2G2 431 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 NOX1Q9Y5S8 564 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZFP37Q9Y6Q3 630 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 PLXNA3P51805 1871 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 GBF1Q92538 1859 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 PTPRDP23468 1912 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 MYO16Q9Y6X6 1858 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 A0A0D9SEW6 157 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 GLYATL1P3A0A0U1RQE8 302 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 PRR23AA6NEV1 266 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 NOTOA8MTQ0 251 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 FADS2P1A8MWK0 482 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms