RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 TBC1D21Q8IYX1 336 aa11.69□□□□□ -0.54
LIN54-206ENST00000506560 ADGRF3Q8IZF5 1079 aa11.69□□□□□ -0.54
LIN54-206ENST00000506560 MARVELD2Q8N4S9 558 aa11.69□□□□□ -0.54
LIN54-206ENST00000506560 CATSPER1Q8NEC5 780 aa11.69□□□□□ -0.54
LIN54-206ENST00000506560 C16orf78Q8WTQ4 265 aa11.69□□□□□ -0.54
LIN54-206ENST00000506560 CCDC115Q96NT0 180 aa11.69□□□□□ -0.54
LIN54-206ENST00000506560 TSC22D3Q99576 134 aa11.69□□□□□ -0.54
LIN54-206ENST00000506560 EHD1Q9H4M9 534 aa11.69□□□□□ -0.54
LIN54-206ENST00000506560 SCOCQ9UIL1 159 aa11.69□□□□□ -0.54
LIN54-206ENST00000506560 ICKQ9UPZ9 632 aa11.69□□□□□ -0.54
LIN54-206ENST00000506560 MUC3AQ02505 3323 aa11.69□□□□□ -0.54
LIN54-206ENST00000506560 CCDC88CQ9P219 2028 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 IL3P08700 152 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 ACADMP11310 421 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 PEBP1P30086 187 aaKnown RBP11.68□□□□□ -0.54
LIN54-206ENST00000506560 SNRPNP63162 240 aaKnown RBP11.68□□□□□ -0.54
LIN54-206ENST00000506560 HBA1P69905 142 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 SRSF11Q05519 484 aaKnown RBP11.68□□□□□ -0.54
LIN54-206ENST00000506560 ZNF33BQ06732 778 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 DMPKQ09013 629 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 ZNF763Q0D2J5 394 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 CCINQ13939 588 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 COL19A1Q14993 1142 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 ADRM1Q16186 407 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 HIST2H2ACQ16777 129 aaPredicted RBP11.68□□□□□ -0.54
LIN54-206ENST00000506560 OTUD3Q5T2D3 398 aaPredicted RBP11.68□□□□□ -0.54
LIN54-206ENST00000506560 HIST2H2AA3Q6FI13 130 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 PPP4R4Q6NUP7 873 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 GALNT18Q6P9A2 607 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 PTOV1Q86YD1 416 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 CHERPQ8IWX8 916 aaKnown RBP11.68□□□□□ -0.54
LIN54-206ENST00000506560 FBXL6Q8N531 539 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 OR2A1Q8NGT9 310 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 OR5AK3PQ8NH89 298 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 SETD7Q8WTS6 366 aaKnown RBP11.68□□□□□ -0.54
LIN54-206ENST00000506560 NECTIN4Q96NY8 510 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 TMEM168Q9H0V1 697 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 LHX9Q9NQ69 397 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 GPATCH2Q9NW75 528 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 RAB26Q9ULW5 256 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 DNMT3AQ9Y6K1 912 aaPredicted RBP11.68□□□□□ -0.54
LIN54-206ENST00000506560 RNF103-CHMP3A0A140T963 221 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 CACNB4O00305 520 aaPredicted RBP11.68□□□□□ -0.54
LIN54-206ENST00000506560 C6orf47O95873 294 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 SERPIND1P05546 499 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 C2orf80Q0P641 193 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 ATP6AP1Q15904 470 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 NHSL2Q5HYW2 709 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 COX20Q5RI15 118 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 SLC30A9Q6PML9 568 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 DGLUCYQ7Z3D6 616 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 GPR155Q7Z3F1 870 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 METTL4Q8N3J2 472 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 SMPDL3AQ92484 453 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 SNX19Q92543 992 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 REPS1Q96D71 796 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 VCXQ9H320 206 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 GORASP2Q9H8Y8 452 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 TPT1P8Q9HAU6 139 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 LTB4R2Q9NPC1 389 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 ACSL5Q9ULC5 683 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 SNX11Q9Y5W9 270 aa11.68□□□□□ -0.54
LIN54-206ENST00000506560 C1orf226A1L170 272 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 FAM220BPB1ANY3 271 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 C4orf51C9J302 202 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 OR1F1O43749 312 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 KCNK5O95279 499 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 PGM3O95394 542 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 FURINP09958 794 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 ZNF23P17027 643 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 DRD1P21728 446 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 TEAD1P28347 426 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 AQP1P29972 269 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 CCR3P51677 355 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 CHN2P52757 468 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 CTBSQ01459 385 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 RPE65Q16518 533 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 LRRC23Q53EV4 343 aaPredicted RBP11.67□□□□□ -0.54
LIN54-206ENST00000506560 ZNF542PQ5EBM4 170 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.67□□□□□ -0.54
LIN54-206ENST00000506560 IRAK1BP1Q5VVH5 260 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 SLC9B2Q86UD5 537 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 TIMM29Q9BSF4 260 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 C6orf106Q9H6K1 298 aaPredicted RBP11.67□□□□□ -0.54
LIN54-206ENST00000506560 PREBQ9HCU5 417 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 FAM120CQ9NX05 1096 aaKnown RBP11.67□□□□□ -0.54
LIN54-206ENST00000506560 CNOT11Q9UKZ1 510 aaKnown RBP11.67□□□□□ -0.54
LIN54-206ENST00000506560 SCN2AQ99250 2005 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 PRMT3O60678 531 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 PRKRAO75569 313 aaKnown RBP11.67□□□□□ -0.54
LIN54-206ENST00000506560 EPN2O95208 641 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 FESP07332 822 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 SMIM18P0DKX4 95 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 BMP8BP34820 402 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 PTGER1P34995 402 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 CSNK1G2P78368 415 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 UAP1L1Q3KQV9 507 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 FAM71E1Q6IPT2 247 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 VTCN1Q7Z7D3 282 aa11.67□□□□□ -0.54
LIN54-206ENST00000506560 TMEM179BQ7Z7N9 219 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms