RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 A4D1N5 150 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 PMS2P5A8MQ11 134 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 IFIT3O14879 490 aaKnown RBP5.34□□□□□ -1.55
HERC4-213ENST00000506515 SELENOFO60613 162 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 IGHV4-59P01825 116 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 SERPING1P05155 500 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 EPORP19235 508 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 ITGA3P26006 1051 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 TWISTNBQ3B726 338 aaPredicted RBP5.34□□□□□ -1.55
HERC4-213ENST00000506515 KIAA1644Q3SXP7 199 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 SLC25A53Q5H9E4 307 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 ARHGEF16Q5VV41 709 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 TXNRD3NBQ6F5E7 133 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 ZNF530Q6P9A1 599 aaPredicted RBP5.34□□□□□ -1.55
HERC4-213ENST00000506515 CYB5D1Q6P9G0 228 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 C11orf88Q6PI97 169 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 SLC16A9Q7RTY1 509 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 PIGZQ86VD9 579 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 HOOK3Q86VS8 718 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 TTC5Q8N0Z6 440 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 KLHDC1Q8N7A1 406 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 OR13C3Q8NGS6 347 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 RIT1Q92963 219 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 PGM2Q96G03 612 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 PARK7Q99497 189 aaKnown RBP5.34□□□□□ -1.55
HERC4-213ENST00000506515 SHARPINQ9H0F6 387 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 RAB9BQ9NP90 201 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 CHST11Q9NPF2 352 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 SLC52A3Q9NQ40 469 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 INTS9Q9NV88 658 aaKnown RBP5.34□□□□□ -1.55
HERC4-213ENST00000506515 SEPT10Q9P0V9 454 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 CHKBQ9Y259 395 aa5.34□□□□□ -1.55
HERC4-213ENST00000506515 MAP2P11137 1827 aaKnown RBP5.34□□□□□ -1.55
HERC4-213ENST00000506515 STK36Q9NRP7 1315 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 A0A0U1RQK1 487 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 ZNF320A2RRD8 509 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 ST8SIA3O43173 380 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 EDN1P05305 212 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 UMODP07911 640 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 LHCGRP22888 699 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 ATP5DP30049 168 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 SOAT1P35610 550 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 TIMP3P35625 211 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 KRT2P35908 639 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 HERV-K104P61576 105 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 TRAP1Q12931 704 aaKnown RBP5.33□□□□□ -1.56
HERC4-213ENST00000506515 P2RY6Q15077 328 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 CDO1Q16878 200 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 GTDC1Q4AE62 458 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 PIWIL3Q7Z3Z3 882 aaKnown RBP5.33□□□□□ -1.56
HERC4-213ENST00000506515 CNBD1Q8NA66 436 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 ATAD1Q8NBU5 361 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 UXS1Q8NBZ7 420 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 OR4C3Q8NH37 302 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 TSACCQ96A04 125 aaPredicted RBP5.33□□□□□ -1.56
HERC4-213ENST00000506515 MLPHQ9BV36 600 aaPredicted RBP5.33□□□□□ -1.56
HERC4-213ENST00000506515 CPVLQ9H3G5 476 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 ARGLU1Q9NWB6 273 aaPredicted RBP5.33□□□□□ -1.56
HERC4-213ENST00000506515 PKD2L2Q9NZM6 624 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 C2CD2Q9Y426 696 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 R4GN57 208 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 WDR81Q562E7 1941 aa5.33□□□□□ -1.56
HERC4-213ENST00000506515 KDRP35968 1356 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 CARMIL3Q8ND23 1372 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 PI4K2BG5E9Z4 385 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 CCL24O00175 119 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 STX6O43752 255 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 DFFBO76075 338 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 PLGP00747 810 aaPredicted RBP5.32□□□□□ -1.56
HERC4-213ENST00000506515 APOHP02749 345 aaPredicted RBP5.32□□□□□ -1.56
HERC4-213ENST00000506515 ERVK-10P10266 1014 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 TIA1P31483 386 aaKnown RBP eCLIP5.32□□□□□ -1.566e-6■■□□□ 11.4
HERC4-213ENST00000506515 TCF7P36402 384 aaPredicted RBP5.32□□□□□ -1.56
HERC4-213ENST00000506515 KCNJ10P78508 379 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 RBBP7Q16576 425 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 MEP1BQ16820 701 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 SUSD4Q5VX71 490 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 LYSMD4Q5XG99 296 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 NOTUMQ6P988 496 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 CTR9Q6PD62 1173 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 MEX3BQ6ZN04 569 aaKnown RBP5.32□□□□□ -1.56
HERC4-213ENST00000506515 IL17RELQ6ZVW7 336 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 C4orf19Q8IY42 314 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 TMCO5AQ8N6Q1 288 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 CCDC63Q8NA47 563 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 HPSE2Q8WWQ2 592 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 SEPT1Q8WYJ6 367 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 MAP3K3Q99759 626 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 CDH7Q9ULB5 785 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 RGPD2P0DJD1 1756 aa5.32□□□□□ -1.56
HERC4-213ENST00000506515 YDJCA8MPS7 323 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 FPGTO14772 594 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 FLRT2O43155 660 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 TRMUO75648 421 aaKnown RBP5.31□□□□□ -1.56
HERC4-213ENST00000506515 CD48P09326 243 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 ALDH4A1P30038 563 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 CACNG1Q06432 222 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 ANKRD20A4Q4UJ75 823 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 ANKRD20A8PQ5CZ79 823 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 ANKRD20A2Q5SQ80 823 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms