RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 HIST2H2ACQ16777 129 aaPredicted RBP15.84■□□□□ 0.13
SNCA-209ENST00000506244 FBXO48Q5FWF7 155 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 FAM69BQ5VUD6 431 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 HIST2H2AA3Q6FI13 130 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.84■□□□□ 0.13
SNCA-209ENST00000506244 PLD6Q8N2A8 252 aaKnown RBP15.84■□□□□ 0.13
SNCA-209ENST00000506244 DTWD1Q8N5C7 304 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 AMER3Q8N944 861 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 KCT2Q8NC54 265 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 STT3BQ8TCJ2 826 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 ESAMQ96AP7 390 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 WDR34Q96EX3 536 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 FER1L6-AS2Q96M78 137 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 BBC3Q96PG8 261 aaPredicted RBP15.84■□□□□ 0.13
SNCA-209ENST00000506244 CRB3Q9BUF7 120 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 YIPF2Q9BWQ6 316 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 TGIF2Q9GZN2 237 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 SPNS1Q9H2V7 528 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 SOX17Q9H6I2 414 aaPredicted RBP15.84■□□□□ 0.13
SNCA-209ENST00000506244 ACSS2Q9NR19 701 aa15.84■□□□□ 0.13
SNCA-209ENST00000506244 ARGFXA6NJG6 315 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 UMODP07911 640 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 CYC1P08574 325 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 ZGLP1P0C6A0 271 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 ALOX12P18054 663 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 SERPINB1P30740 379 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 AGTR2P50052 363 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 CHIT1Q13231 466 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 ATP1A4Q13733 1029 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 PCBP2Q15366 365 aaKnown RBP eCLIP15.83■□□□□ 0.12
SNCA-209ENST00000506244 RBBP7Q16576 425 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 TDRPQ86YL5 185 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 ANKRD53Q8N9V6 530 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 CLEC1AQ8NC01 280 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 OR9A4Q8NGU2 314 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 C9orf43Q8TAL5 461 aaPredicted RBP15.83■□□□□ 0.12
SNCA-209ENST00000506244 ING2Q9H160 280 aa15.83■□□□□ 0.12
SNCA-209ENST00000506244 MRPS2Q9Y399 296 aaKnown RBP15.83■□□□□ 0.12
SNCA-209ENST00000506244 A0A088AWK7 358 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 ANKDD1BA6NHY2 528 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 STX16-NPEPL1H3BU86 382 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 STX16O14662 325 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 CDH16O75309 829 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 CLEC3AO75596 197 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 KLHL18O94889 574 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 TUBBP07437 444 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 GSTA1P08263 222 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 ZNF10P21506 573 aaPredicted RBP15.82■□□□□ 0.12
SNCA-209ENST00000506244 KLC1Q07866 573 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 PCDH1Q08174 1060 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 DOC2AQ14183 400 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 RASA2Q15283 850 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 PPP1R32Q7Z5V6 425 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 AFAP1L2Q8N4X5 818 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 TEX9Q8N6V9 391 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 PTGR2Q8N8N7 351 aaPredicted RBP15.82■□□□□ 0.12
SNCA-209ENST00000506244 EXD3Q8N9H8 876 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 CCT6BQ92526 530 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 GAL3ST3Q96A11 431 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 MACROD1Q9BQ69 325 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 SLC6A16Q9GZN6 736 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 CLK4Q9HAZ1 481 aaKnown RBP15.82■□□□□ 0.12
SNCA-209ENST00000506244 PRM3Q9NNZ6 103 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 P4HTMQ9NXG6 502 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 TBK1Q9UHD2 729 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 C3orf18Q9UK00 162 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 NAALAD2Q9Y3Q0 740 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 ASB1Q9Y576 335 aa15.82■□□□□ 0.12
SNCA-209ENST00000506244 AGPSO00116 658 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 KLHL41O60662 606 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 UGDHO60701 494 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 NUDT17P0C025 328 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 ZNF888P0CJ79 500 aaPredicted RBP15.81■□□□□ 0.12
SNCA-209ENST00000506244 KRT15P19012 456 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 TAC1P20366 129 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 IL10P22301 178 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 HSD17B3P37058 310 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 HNF4AP41235 474 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 CASP2P42575 452 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 TGM3Q08188 693 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 E2F2Q14209 437 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 CPZQ66K79 652 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 SHISA6Q6ZSJ9 500 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 ZC3H7AQ8IWR0 971 aaKnown RBP15.81■□□□□ 0.12
SNCA-209ENST00000506244 RIBC1Q8N443 379 aaPredicted RBP15.81■□□□□ 0.12
SNCA-209ENST00000506244 CREB3L4Q8TEY5 395 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 AENQ8WTP8 325 aaKnown RBP15.81■□□□□ 0.12
SNCA-209ENST00000506244 MOCOSQ96EN8 888 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 OR1F2PQ96R84 312 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 SLC25A18Q9H1K4 315 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 ZNF358Q9NW07 568 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.81■□□□□ 0.12
SNCA-209ENST00000506244 ADGRE2Q9UHX3 823 aa15.81■□□□□ 0.12
SNCA-209ENST00000506244 V9GYY5 206 aaPredicted RBP15.81■□□□□ 0.12
SNCA-209ENST00000506244 ATMQ13315 3056 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 IDSB3KWA1 339 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 SGK494L7N484 410 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 GALR3O60755 368 aaPredicted RBP15.8■□□□□ 0.12
SNCA-209ENST00000506244 RDH16O75452 317 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 SHBGP04278 402 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms