RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 RTP2Q5QGT7 225 aa15.65■□□□□ 0.1
HMGXB3-202ENST00000503427 PRPF38BQ5VTL8 546 aaKnown RBP15.65■□□□□ 0.1
HMGXB3-202ENST00000503427 OR6K6Q8NGW6 343 aa15.65■□□□□ 0.1
HMGXB3-202ENST00000503427 TUBA1CQ9BQE3 449 aa15.65■□□□□ 0.1
HMGXB3-202ENST00000503427 YIPF4Q9BSR8 244 aa15.65■□□□□ 0.1
HMGXB3-202ENST00000503427 KCNH6Q9H252 994 aa15.65■□□□□ 0.1
HMGXB3-202ENST00000503427 BAIAP2Q9UQB8 552 aa15.65■□□□□ 0.1
HMGXB3-202ENST00000503427 PLCH1Q4KWH8 1693 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 ERI3O43414 337 aaKnown RBP15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 ADH1BP00325 375 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 ATF6P18850 670 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 GNALP38405 381 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 BDKRB1P46663 353 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 GJA8P48165 433 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 CREB5Q02930 508 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 NIPAL4Q0D2K0 466 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 PTPRCAPQ14761 206 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 HACD2Q6Y1H2 254 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 GOLM1Q8NBJ4 401 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 TFGQ92734 400 aaPredicted RBP15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 IGSF8Q969P0 613 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 MRGPRX2Q96LB1 330 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 TBX5Q99593 518 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 GMEB1Q9Y692 573 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 RASAL1O95294 804 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 TACSTD2P09758 323 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 CHRM1P11229 460 aaPredicted RBP15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 HOXB2P14652 356 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 IL12BP29460 328 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 ADAM8P78325 824 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 TXNL4AP83876 142 aaKnown RBP15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 GRIK2Q13002 908 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 QSOX2Q6ZRP7 698 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 CHCHD4Q8N4Q1 142 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 FATE1Q969F0 183 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 GAL3ST4Q96RP7 486 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 PLEKHA1Q9HB21 404 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 CDH7Q9ULB5 785 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 ITGA10O75578 1167 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 STC2O76061 302 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 RCBTB2O95199 551 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 HPRP00739 348 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 RENP00797 406 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 ITGB1P05556 798 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 AGTR2P50052 363 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 ARF5P84085 180 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 ST3GAL3Q11203 375 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 ASRGL1Q7L266 308 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 SUN5Q8TC36 379 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 MUS81Q96NY9 551 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 PREBQ9HCU5 417 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 PCDHB3Q9Y5E6 796 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 NHSL1Q5SYE7 1610 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 MAFKO60675 156 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 CLIC3O95833 236 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 YES1P07947 543 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 PABPC4LP0CB38 370 aaKnown RBP15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 GLDCP23378 1020 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 DGKEP52429 567 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 TMIGD1Q6UXZ0 262 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 GPALPP1Q8IXQ4 340 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 NR4A3Q92570 626 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 TMEM203Q969S6 136 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 PGAP3Q96FM1 320 aaPredicted RBP15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 SLC2A11Q9BYW1 496 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 SMG9Q9H0W8 520 aaKnown RBP15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 TBCCD1Q9NVR7 557 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 TAC3Q9UHF0 121 aa15.64■□□□□ 0.09
HMGXB3-202ENST00000503427 KAT6AQ92794 2004 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 CLCN7P51798 805 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 CEACAM7Q14002 265 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 PLEKHS1Q5SXH7 462 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 RC3H2Q9HBD1 1191 aaKnown RBP15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 MYH8P13535 1937 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 SCAMP1O15126 338 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 GMFGO60234 142 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 PRMT3O60678 531 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 SNNO75324 88 aaPredicted RBP15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 SEMA3DO95025 777 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 TNFP01375 233 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 TAS2R50P59544 299 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 RAB33AQ14088 237 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 SLC8B1Q6J4K2 584 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 FBXO46Q6PJ61 603 aaPredicted RBP15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 FAM46DQ8NEK8 389 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 OR10Q1Q8NGQ4 319 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 SLC5A11Q8WWX8 675 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 BHLHE41Q9C0J9 482 aaPredicted RBP15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 COPS7AQ9UBW8 275 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 SEC14L4Q9UDX3 406 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 UTS2RQ9UKP6 389 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 MKL2Q9ULH7 1088 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 FAM170BA6NMN3 283 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 DFNA5O60443 496 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 LINGO3P0C6S8 592 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 KCNA5P22460 613 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 UNC50Q53HI1 259 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 ZNF805Q5CZA5 627 aa15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 C10orf62Q5T681 223 aaPredicted RBP15.63■□□□□ 0.09
HMGXB3-202ENST00000503427 ZNF517Q6ZMY9 492 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms