RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PTGR2Q8N8N7 351 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 OR9A4Q8NGU2 314 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 ZCCHC10Q8TBK6 192 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 STT3BQ8TCJ2 826 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 CREB3L4Q8TEY5 395 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 NACC2Q96BF6 587 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 ARHGAP9Q9BRR9 750 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 SLC6A16Q9GZN6 736 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 ANKHQ9HCJ1 492 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 MAN2B2Q9Y2E5 1009 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 MAP4K5Q9Y4K4 846 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 FER1L5A0AVI2 2057 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 FAM208BQ5VWN6 2430 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 STX16-NPEPL1H3BU86 382 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 STX16O14662 325 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 SMIM24O75264 130 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 CDH16O75309 829 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 SERPIND1P05546 499 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 GSTA1P08263 222 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 SBK3P0C264 359 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 ZGLP1P0C6A0 271 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 PYGBP11216 843 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 IL1RNP18510 177 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 HYAL2Q12891 473 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 CHIT1Q13231 466 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 HERC3Q15034 1050 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 SH2D5Q6ZV89 423 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 PRSS41Q7RTY9 318 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 APLFQ8IW19 511 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 TMEM151BQ8IW70 566 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 MREGQ8N565 214 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 EXD3Q8N9H8 876 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 EPS8L3Q8TE67 593 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 MIEF2Q96C03 454 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 IP6K3Q96PC2 410 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 TGIF2Q9GZN2 237 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 RHBGQ9H310 441 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 MKKSQ9NPJ1 570 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 C14orf105Q9NVL8 296 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 TMEM216Q9P0N5 145 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 TRPC4Q9UBN4 977 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 ZNF490Q9ULM2 529 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 ANGPTL3Q9Y5C1 460 aa17.29■□□□□ 0.36
PDLIM7-209ENST00000503346 A0A1W2PPM1 405 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 URADA6NGE7 173 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 LRRC14BA6NHZ5 514 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 GOLGA8RI6L899 631 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 E2F3O00716 465 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 CLEC3AO75596 197 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 KLHL18O94889 574 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 SIX3O95343 332 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 ALOX12P18054 663 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 OTX2P32243 289 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 PIK3CGP48736 1102 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 POLE2P56282 527 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 HIST2H2ACQ16777 129 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 HIST2H2AA3Q6FI13 130 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 NIPAL1Q6NVV3 410 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 ABHD13Q7L211 337 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 PPP1R32Q7Z5V6 425 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 MRGPREQ86SM8 312 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 PDSS2Q86YH6 399 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 CYP4X1Q8N118 509 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 UTP15Q8TED0 518 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 UBE2E3Q969T4 207 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 PHF21BQ96EK2 531 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 ADNPQ9H2P0 1102 aa17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 SOX17Q9H6I2 414 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-209ENST00000503346 SMIM23A6NLE4 172 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 SGK494L7N484 410 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 GALR3O60755 368 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 IGHEP01854 428 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 FAM87AP0C7U9 286 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 SMIM10L1P0DMW3 83 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 KRT15P19012 456 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 MMP11P24347 488 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 EEF1DP29692 281 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 STXBP1P61764 594 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 MAT1AQ00266 395 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 KLC1Q07866 573 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 GTF2H2Q13888 395 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 SYT16Q17RD7 645 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 VWA2Q5GFL6 755 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 GTF2H2CQ6P1K8 395 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 GOLGA7Q7Z5G4 137 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 VN1R5Q7Z5H4 357 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 ZC3H7AQ8IWR0 971 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 RIBC1Q8N443 379 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 OR2W6PQ8NHA6 318 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 SLC39A7Q92504 469 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 SMIM10Q96HG1 83 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 YIPF2Q9BWQ6 316 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 AICDAQ9GZX7 198 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 SEMA3GQ9NS98 782 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 DCDC2Q9UHG0 476 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 TUBD1Q9UJT1 453 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 NAALAD2Q9Y3Q0 740 aa17.27■□□□□ 0.36
PDLIM7-209ENST00000503346 IGSF10Q6WRI0 2623 aa17.27■□□□□ 0.35
PDLIM7-209ENST00000503346 MDC1Q14676 2089 aaKnown RBP17.27■□□□□ 0.35
PDLIM7-209ENST00000503346 ATMQ13315 3056 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms