RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 MEGF6O75095 1541 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 TRMUO75648 421 aaKnown RBP5.61□□□□□ -1.51
NEDD4-203ENST00000502612 RLN1P04808 185 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 ITGA3P26006 1051 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 ALDH3A2P51648 485 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 LBX1P52954 281 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 CDR2Q01850 454 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 YWHAHQ04917 246 aaPredicted RBP5.61□□□□□ -1.51
NEDD4-203ENST00000502612 KIAA1644Q3SXP7 199 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 GPR33Q49SQ1 333 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 FAM166AQ6J272 317 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 FAM53AQ6NSI3 398 aaPredicted RBP5.61□□□□□ -1.51
NEDD4-203ENST00000502612 ANKRD33Q7Z3H0 272 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 NDUFAF2Q8N183 169 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 OR2T11Q8NH01 316 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 DNASE1L2Q92874 299 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 P2RX5Q93086 422 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 ZNF501Q96CX3 271 aaPredicted RBP5.61□□□□□ -1.51
NEDD4-203ENST00000502612 NOTCH4Q99466 2003 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 NDNQ99608 321 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 MAP3K3Q99759 626 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 MLPHQ9BV36 600 aaPredicted RBP5.61□□□□□ -1.51
NEDD4-203ENST00000502612 WWOXQ9NZC7 414 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 SEPT10Q9P0V9 454 aa5.61□□□□□ -1.51
NEDD4-203ENST00000502612 ARMCX3Q9UH62 379 aaPredicted RBP5.61□□□□□ -1.51
NEDD4-203ENST00000502612 PARP4Q9UKK3 1724 aaKnown RBP5.61□□□□□ -1.51
NEDD4-203ENST00000502612 PKD1L3Q7Z443 1732 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 COL5A2P05997 1499 aaPredicted RBP5.6□□□□□ -1.51
NEDD4-203ENST00000502612 PRSS46E5RG02 174 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 LUC7L3O95232 432 aaKnown RBP5.6□□□□□ -1.51
NEDD4-203ENST00000502612 APOHP02749 345 aaPredicted RBP5.6□□□□□ -1.51
NEDD4-203ENST00000502612 ANKRD34CP0C6C1 535 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 PATE4P0C8F1 98 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 MYL6BP14649 208 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 CHMLP26374 656 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 TRAP1Q12931 704 aaKnown RBP5.6□□□□□ -1.51
NEDD4-203ENST00000502612 GCKRQ14397 625 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 CDO1Q16878 200 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 GTDC1Q4AE62 458 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 LYSMD4Q5XG99 296 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 PRSS55Q6UWB4 352 aaPredicted RBP5.6□□□□□ -1.51
NEDD4-203ENST00000502612 C15orf39Q6ZRI6 1047 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 MSANTD1Q6ZTZ1 278 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 USP43Q70EL4 1123 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 COPS6Q7L5N1 327 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 PIGWQ7Z7B1 504 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 CUZD1Q86UP6 607 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 HOOK3Q86VS8 718 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 TRIM58Q8NG06 486 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 OR13C3Q8NGS6 347 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 VMP1Q96GC9 406 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 PRAC1Q96KF2 57 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 PARK7Q99497 189 aaKnown RBP5.6□□□□□ -1.51
NEDD4-203ENST00000502612 CPVLQ9H3G5 476 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 TMOD3Q9NYL9 352 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 FLRT3Q9NZU0 649 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 ITGA11Q9UKX5 1188 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 PPP2R2CQ9Y2T4 447 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 COL18A1P39060 1754 aa5.6□□□□□ -1.51
NEDD4-203ENST00000502612 RAD50Q92878 1312 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 FAM170AA1A519 330 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 C17orf105B2RV13 164 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 PSMA7O14818 248 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 IKBKBO14920 756 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 FLRT2O43155 660 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 NME6O75414 186 aaPredicted RBP5.59□□□□□ -1.51
NEDD4-203ENST00000502612 FRAT2O75474 233 aaPredicted RBP5.59□□□□□ -1.51
NEDD4-203ENST00000502612 DFFBO76075 338 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 CLPTM1O96005 669 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 PRSS56P0CW18 603 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 KRT2P35908 639 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 SP3Q02447 781 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 SLMAPQ14BN4 828 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 EXT1Q16394 746 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 MEP1BQ16820 701 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 HSP90AB3PQ58FF7 597 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 UGT3A1Q6NUS8 523 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 CTR9Q6PD62 1173 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 AMIGO1Q86WK6 493 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 APLFQ8IW19 511 aaPredicted RBP5.59□□□□□ -1.51
NEDD4-203ENST00000502612 KIRREL3Q8IZU9 778 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 LRTM2Q8N967 370 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 ATAD1Q8NBU5 361 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 NOA1Q8NC60 698 aaKnown RBP5.59□□□□□ -1.51
NEDD4-203ENST00000502612 DBF4BQ8NFT6 615 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 FIBINQ8TAL6 211 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 TSACCQ96A04 125 aaPredicted RBP5.59□□□□□ -1.51
NEDD4-203ENST00000502612 THAP2Q9H0W7 228 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 CWC25Q9NXE8 425 aaPredicted RBP5.59□□□□□ -1.51
NEDD4-203ENST00000502612 CHKBQ9Y259 395 aa5.59□□□□□ -1.51
NEDD4-203ENST00000502612 SIPA1L3O60292 1781 aaPredicted RBP5.59□□□□□ -1.51
NEDD4-203ENST00000502612 RFX7Q2KHR2 1363 aa5.58□□□□□ -1.52
NEDD4-203ENST00000502612 STRCP1A6NGW2 1772 aa5.58□□□□□ -1.52
NEDD4-203ENST00000502612 SCN11AQ9UI33 1791 aa5.58□□□□□ -1.52
NEDD4-203ENST00000502612 CRYBG1Q9Y4K1 1723 aa5.58□□□□□ -1.52
NEDD4-203ENST00000502612 YDJCA8MPS7 323 aa5.58□□□□□ -1.52
NEDD4-203ENST00000502612 F8VVB4 439 aa5.58□□□□□ -1.52
NEDD4-203ENST00000502612 F8VWA3 439 aa5.58□□□□□ -1.52
NEDD4-203ENST00000502612 SLC30A4O14863 429 aa5.58□□□□□ -1.52
NEDD4-203ENST00000502612 IFIT3O14879 490 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms