RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 REG4Q9BYZ8 158 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 SHARPINQ9H0F6 387 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 PPA2Q9H2U2 334 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 SPNS1Q9H2V7 528 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 GSN-AS1Q9NRJ2 163 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 TMEM30AQ9NV96 361 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 OXSMQ9NWU1 459 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 VNN3Q9NY84 501 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 MPP6Q9NZW5 540 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 PAK5Q9P286 719 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 CDH9Q9ULB4 789 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 V9GYH0 126 aa5.59□□□□□ -1.51
SOX2-OT-218ENST00000498731 TRIOO75962 3097 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 A0A1B0GTL3 188 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 A0A1W2PRG6 482 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 FAM92AA1XBS5 289 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 PLA2G10O15496 165 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 TRIM13O60858 407 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 LY86O95711 162 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 NTRK1P04629 796 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 KLK3P07288 261 aaPredicted RBP5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 JUPP14923 745 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 WARSP23381 471 aaKnown RBP5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 CHMP24386 653 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 MYL9P24844 172 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 NOMO1Q15155 1222 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 TATDN3Q17R31 274 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 KIF19Q2TAC6 998 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 MINDY4Q4G0A6 757 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 C10orf120Q5SQS8 335 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 PRSS55Q6UWB4 352 aaPredicted RBP5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 TIFABQ6ZNK6 161 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 PAQR9Q6ZVX9 377 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 SLC24A5Q71RS6 500 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 LRRC8DQ7L1W4 858 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 CCDC190Q86UF4 302 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 LSRQ86X29 649 aaPredicted RBP5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 KRT73Q86Y46 540 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 NIPA2Q8N8Q9 360 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 SH3RF2Q8TEC5 729 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 ASB15Q8WXK1 588 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 CENPIQ92674 756 aaPredicted RBP5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 YIPF5Q969M3 257 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 PABPC5Q96DU9 382 aaKnown RBP5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 CMTM3Q96MX0 182 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 RBP7Q96R05 134 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 DCLRE1CQ96SD1 692 aaKnown RBP5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 ZNF416Q9BWM5 594 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 ABCB8Q9NUT2 735 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 SYBUQ9NX95 663 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 TNFRSF10DQ9UBN6 386 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 OR12D3Q9UGF7 316 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 SLC6A14Q9UN76 642 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 DTX4Q9Y2E6 619 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 PCDHA11Q9Y5I1 949 aa5.59□□□□□ -1.52
SOX2-OT-218ENST00000498731 ZSWIM8A7E2V4 1837 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 A0A096LPK6 155 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 M0R129 80 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 UBFD1O14562 309 aaKnown RBP5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 TRDMT1O14717 391 aaKnown RBP5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 FABP7O15540 132 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 AKAP8O43823 692 aaKnown RBP5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 DLX3O60479 287 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 POP7O75817 140 aaKnown RBP5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 CNTN5O94779 1100 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 EGFP01133 1207 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 IFNA16P05015 189 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 ACSM4P0C7M7 580 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 HAPLN1P10915 354 aaPredicted RBP5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 C6P13671 934 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 PSMB4P28070 264 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 PIK3CBP42338 1070 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 MAGEA3P43357 314 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 GSK3BP49841 420 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 TPD52P55327 224 aaPredicted RBP5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 DAOAP59103 153 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 IL5RAQ01344 420 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 RPL6Q02878 288 aaKnown RBP5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 HSF2Q03933 536 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 DUSP4Q13115 394 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 UPP1Q16831 310 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 SLC25A52Q3SY17 297 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 FBXO48Q5FWF7 155 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 PAGE3Q5JUK9 113 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 OTUD1Q5VV17 481 aaPredicted RBP5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 NADSYN1Q6IA69 706 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 RAB12Q6IQ22 244 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 WDR73Q6P4I2 378 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 TFAP2EQ6VUC0 442 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 LNX2Q8N448 690 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 WNT2BQ93097 391 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 FBXO32Q969P5 355 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 MARVELD3Q96A59 401 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 PDLIM5Q96HC4 596 aaKnown RBP5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 TRMOQ9BU70 441 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 JAM3Q9BX67 310 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 UPF3AQ9H1J1 476 aaKnown RBP5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 OLA1Q9NTK5 396 aaKnown RBP5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 SMPD4Q9NXE4 827 aa5.58□□□□□ -1.52
SOX2-OT-218ENST00000498731 PRELID3BQ9Y3B1 194 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms