RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 TNFSF10P50591 281 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 SRP54P61011 504 aaKnown RBP4.78□□□□□ -1.64
SRRM1-218ENST00000494934 LCP2Q13094 533 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 DNAJC21Q5F1R6 531 aaKnown RBP4.78□□□□□ -1.64
SRRM1-218ENST00000494934 CATSPER4Q7RTX7 472 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 ADAMTSL2Q86TH1 951 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 STHQ8IWL8 128 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 HDDC3Q8N4P3 179 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 RFLNBQ8N5W9 214 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 GBP7Q8N8V2 638 aaPredicted RBP4.78□□□□□ -1.64
SRRM1-218ENST00000494934 OR2T11Q8NH01 316 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 OR1L3Q8NH93 324 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 EXOC6Q8TAG9 804 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 TM9SF4Q92544 642 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 NAPBQ9H115 298 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 ZNF556Q9HAH1 456 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 ZCCHC3Q9NUD5 404 aaKnown RBP4.78□□□□□ -1.64
SRRM1-218ENST00000494934 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.78□□□□□ -1.64
SRRM1-218ENST00000494934 TMOD3Q9NYL9 352 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 FLRT3Q9NZU0 649 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 SPASTQ9UBP0 616 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 MTF2Q9Y483 593 aaPredicted RBP4.78□□□□□ -1.64
SRRM1-218ENST00000494934 COLEC10Q9Y6Z7 277 aa4.78□□□□□ -1.64
SRRM1-218ENST00000494934 RNF103-CHMP3A0A140T963 221 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 CCDC162PA2VCL2 907 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 SRRM4A7MD48 611 aaKnown RBP4.77□□□□□ -1.65
SRRM1-218ENST00000494934 RNF103O00237 685 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 PSMD3O43242 534 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 CDK2AP2O75956 126 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 CRYAAP02489 173 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 ATP1A1P05023 1023 aaKnown RBP4.77□□□□□ -1.65
SRRM1-218ENST00000494934 YES1P07947 543 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 B4GALT1P15291 398 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 SFNP31947 248 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 CCKARP32238 428 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 NR0B1P51843 470 aaKnown RBP4.77□□□□□ -1.65
SRRM1-218ENST00000494934 ATXN3P54252 364 aaPredicted RBP4.77□□□□□ -1.65
SRRM1-218ENST00000494934 SLC3A1Q07837 685 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 CDH18Q13634 790 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 TRIM29Q14134 588 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 PRAMEF7Q5VXH5 474 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 C19orf48Q6RUI8 117 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 SLC24A5Q71RS6 500 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 G2E3Q7L622 706 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 THEM5Q8N1Q8 247 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 STPG4Q8N801 248 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 OR4A16Q8NH70 328 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 NXPE2Q96DL1 559 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 EEF2KMTQ96G04 330 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 KRT23Q9C075 422 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 MTMR12Q9C0I1 747 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 DPEP2Q9H4A9 486 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 ZDHHC6Q9H6R6 413 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 UBQLN2Q9UHD9 624 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 NCKAP1Q9Y2A7 1128 aa4.77□□□□□ -1.65
SRRM1-218ENST00000494934 TRBV2A0A0J9YWF9 115 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 TRBV4-1A0A0J9YWV2 114 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 ZNF732B4DXR9 585 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 CHUKO15111 745 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 CPA3P15088 417 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 RPA1P27694 616 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 LINC01547P58512 204 aaPredicted RBP4.76□□□□□ -1.65
SRRM1-218ENST00000494934 CDR2Q01850 454 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 RBBP5Q15291 538 aaKnown RBP4.76□□□□□ -1.65
SRRM1-218ENST00000494934 EPC2Q52LR7 807 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 PDLIM3Q53GG5 364 aaPredicted RBP4.76□□□□□ -1.65
SRRM1-218ENST00000494934 FAM76BQ5HYJ3 339 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 WBP2NLQ6ICG8 309 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 MFSD7Q6UXD7 560 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 B3GLCTQ6Y288 498 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 C17orf107Q6ZR85 190 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 BTN2A1Q7KYR7 527 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 ELMOD2Q8IZ81 293 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 CCNYQ8ND76 341 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 TMEM185AQ8NFB2 350 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 CD99L2Q8TCZ2 262 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 APOBEC4Q8WW27 367 aaKnown RBP4.76□□□□□ -1.65
SRRM1-218ENST00000494934 HAS2Q92819 552 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 C10orf90Q96M02 699 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 PKP2Q99959 881 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 TEX13AQ9BXU3 409 aaPredicted RBP4.76□□□□□ -1.65
SRRM1-218ENST00000494934 WWTR1Q9GZV5 400 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 DPEP3Q9H4B8 488 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 ATP13A3Q9H7F0 1226 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 TBC1D13Q9NVG8 400 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 MIS18AQ9NYP9 233 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 TRIM10Q9UDY6 481 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 C19orf25Q9UFG5 118 aaPredicted RBP4.76□□□□□ -1.65
SRRM1-218ENST00000494934 IL36AQ9UHA7 158 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 GRID1Q9ULK0 1009 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 MYH15Q9Y2K3 1946 aa4.76□□□□□ -1.65
SRRM1-218ENST00000494934 A0A087WUV0 522 aaPredicted RBP4.75□□□□□ -1.65
SRRM1-218ENST00000494934 GLTPD2A6NH11 291 aa4.75□□□□□ -1.65
SRRM1-218ENST00000494934 SERINC4A6NH21 518 aa4.75□□□□□ -1.65
SRRM1-218ENST00000494934 SLC28A1O00337 649 aa4.75□□□□□ -1.65
SRRM1-218ENST00000494934 P2RY10O00398 339 aa4.75□□□□□ -1.65
SRRM1-218ENST00000494934 TGFAP01135 160 aa4.75□□□□□ -1.65
SRRM1-218ENST00000494934 MT-ND2P03891 347 aa4.75□□□□□ -1.65
SRRM1-218ENST00000494934 F7P08709 466 aaPredicted RBP4.75□□□□□ -1.65
SRRM1-218ENST00000494934 ODC1P11926 461 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms