RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 TMIGD1Q6UXZ0 262 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 TIFABQ6ZNK6 161 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 ABHD13Q7L211 337 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 PPP1R32Q7Z5V6 425 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 LCA5Q86VQ0 697 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 AFAP1L2Q8N4X5 818 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 ANKRD53Q8N9V6 530 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 CLEC1AQ8NC01 280 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 KCT2Q8NC54 265 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 ZNF740Q8NDX6 193 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 OR9A4Q8NGU2 314 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 ZCCHC10Q8TBK6 192 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 PTCD3Q96EY7 689 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 ABHD17AQ96GS6 310 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 GPR78Q96P69 363 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 CCDC77Q9BR77 488 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 CRB3Q9BUF7 120 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 TRIM55Q9BYV6 548 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 SLC6A16Q9GZN6 736 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 EPB41L4BQ9H329 900 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 ANKZF1Q9H8Y5 726 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 PPCSQ9HAB8 311 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 P4HTMQ9NXG6 502 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 PSMC3IPQ9P2W1 217 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 OPTCQ9UBM4 332 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 TMCO1Q9UM00 188 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 G3BP2Q9UN86 482 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 MRPS2Q9Y399 296 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 PCDHGA9Q9Y5G4 932 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 CCDC88CQ9P219 2028 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 ATMQ13315 3056 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 SOCS6O14544 535 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 MAP2K7O14733 419 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 KLHL41O60662 606 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 CEACAM4O75871 244 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 DNAJB5O75953 348 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 SERPIND1P05546 499 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 SERPINA6P08185 405 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 EPB42P16452 691 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 ALOX12P18054 663 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 PIK3CGP48736 1102 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 ALDH18A1P54886 795 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 FOXL2P58012 376 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 STXBP1P61764 594 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 PCDH1Q08174 1060 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 E2F2Q14209 437 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 RBBP5Q15291 538 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 TBCCQ15814 346 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 RBBP7Q16576 425 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 PFKFB4Q16877 469 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 TUBB8Q3ZCM7 444 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 LACTB2Q53H82 288 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 VWA2Q5GFL6 755 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 XKR6Q5GH73 641 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 PAGE2BQ5JRK9 111 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 DCAF10Q5QP82 559 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 SHISA6Q6ZSJ9 500 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 ZC3H7AQ8IWR0 971 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 PLD6Q8N2A8 252 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 UBE2E3Q969T4 207 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 ESAMQ96AP7 390 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 MOCOSQ96EN8 888 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 MACROD1Q9BQ69 325 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 YIPF2Q9BWQ6 316 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 CLK4Q9HAZ1 481 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 C3orf18Q9UK00 162 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 NAALAD2Q9Y3Q0 740 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 PCDHGB7Q9Y5F8 929 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 TNPO3Q9Y5L0 923 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 HS3ST3B1Q9Y662 390 aa10.1□□□□□ -0.79
CDC42SE1-206ENST00000492796 A0A1W2PQ72 361 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 IDSB3KWA1 339 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 B8ZZF3 427 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 SGK494L7N484 410 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 GALR3O60755 368 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 CLEC3AO75596 197 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 KLHL18O94889 574 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 ZNF888P0CJ79 500 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 ACPPP15309 386 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 EPORP19235 508 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 IL10P22301 178 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 SERPINB1P30740 379 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 CASP2P42575 452 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 AGTR2P50052 363 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 CCL11P51671 97 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 SOX8P57073 446 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 MAT1AQ00266 395 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 IRF8Q02556 426 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 HYAL2Q12891 473 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 NFATC3Q12968 1075 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 CHAF1BQ13112 559 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 CHIT1Q13231 466 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 DOC2AQ14183 400 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 PCBP2Q15366 365 aaKnown RBP eCLIP10.09□□□□□ -0.797e-7■■■■■ 29.1
CDC42SE1-206ENST00000492796 HIST2H2ACQ16777 129 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 HIST2H2AA3Q6FI13 130 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 PRSS41Q7RTY9 318 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 PDSS2Q86YH6 399 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 HPS6Q86YV9 775 aa10.09□□□□□ -0.79
CDC42SE1-206ENST00000492796 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms