RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 TCP11L1Q9NUJ3 509 aa3.04□□□□□ -1.92
VPS36-205ENST00000492650 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.04□□□□□ -1.92
VPS36-205ENST00000492650 MTMR10Q9NXD2 777 aa3.04□□□□□ -1.92
VPS36-205ENST00000492650 SMPD3Q9NY59 655 aaPredicted RBP3.04□□□□□ -1.92
VPS36-205ENST00000492650 RAI14Q9P0K7 980 aa3.04□□□□□ -1.92
VPS36-205ENST00000492650 DNPEPQ9ULA0 475 aa3.04□□□□□ -1.92
VPS36-205ENST00000492650 PADI3Q9ULW8 664 aa3.04□□□□□ -1.92
VPS36-205ENST00000492650 KCNK6Q9Y257 313 aa3.04□□□□□ -1.92
VPS36-205ENST00000492650 NUDCQ9Y266 331 aa3.04□□□□□ -1.92
VPS36-205ENST00000492650 CHTOPQ9Y3Y2 248 aaKnown RBP3.04□□□□□ -1.92
VPS36-205ENST00000492650 DDX49Q9Y6V7 483 aaKnown RBP3.04□□□□□ -1.92
VPS36-205ENST00000492650 TTC41PQ6P2S7 1318 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 MROH5Q6ZUA9 1318 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 TRIM49BA6NDI0 452 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 ZSCAN5BA6NJL1 495 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 E9PBE3 544 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 H3BQ06 376 aaPredicted RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 PLK4O00444 970 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 NR5A2O00482 541 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 HS3ST1O14792 307 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 HSF2BPO75031 334 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 ERLIN1O75477 346 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 TOMM70O94826 608 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 SLITRK3O94933 977 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 CXCL14O95715 111 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 SBK2P0C263 348 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 GALP22466 123 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 HNRNPA2B1P22626 353 aaKnown RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 NR2F2P24468 414 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 PTPN4P29074 926 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 CCND3P30281 292 aaPredicted RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 ZNF75DP51815 510 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 IRX1P78414 480 aaPredicted RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 MRPS34P82930 218 aaKnown RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 SPIBQ01892 262 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 HSPB3Q12988 150 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 SPP2Q13103 211 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 TSTA3Q13630 321 aaPredicted RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 DDX39BQ13838 428 aaKnown RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 PDE7AQ13946 482 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 GIT2Q14161 759 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 KRT33BQ14525 404 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 MAPK11Q15759 364 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 CFAP221Q4G0U5 840 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 KCTD21Q4G0X4 260 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 KLHL26Q53HC5 615 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 CFAP157Q5JU67 520 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.03□□□□□ -1.92
VPS36-205ENST00000492650 C18orf63Q68DL7 685 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 TXNRD3NBQ6F5E7 133 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 NOTUMQ6P988 496 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 CES3Q6UWW8 571 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 ARSKQ6UWY0 536 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 RBMS3Q6XE24 437 aaKnown RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 MACC1Q6ZN28 852 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 TAS2R42Q7RTR8 314 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 NOTCH2NLQ7Z3S9 236 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 APLFQ8IW19 511 aaPredicted RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 BBS5Q8N3I7 341 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 FBXO39Q8N4B4 442 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 EIF1ADQ8N9N8 165 aaKnown RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 L3MBTL4Q8NA19 623 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 CLEC1AQ8NC01 280 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 THAP6Q8TBB0 222 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 WDR20Q8TBZ3 569 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 FCAMRQ8WWV6 532 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 METTL21AQ8WXB1 218 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 RAD54LQ92698 747 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 TAAR8Q969N4 342 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 RRNAD1Q96FB5 475 aaKnown RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 PIWIL1Q96J94 861 aaKnown RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 ART5Q96L15 291 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 NECTIN4Q96NY8 510 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 RBM14Q96PK6 669 aaKnown RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 NUDCD1Q96RS6 583 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 ASCL2Q99929 193 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 EDEM2Q9BV94 578 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 CARD9Q9H257 536 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 RPF1Q9H9Y2 349 aaKnown RBP3.03□□□□□ -1.92
VPS36-205ENST00000492650 EQTNQ9NQ60 294 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 HOMER3Q9NSC5 361 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 SLCO1C1Q9NYB5 712 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 SUN2Q9UH99 717 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 UBQLN2Q9UHD9 624 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 ATP6V1HQ9UI12 483 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 GRID1Q9ULK0 1009 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 ITM2BQ9Y287 266 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 PRSS21Q9Y6M0 314 aa3.03□□□□□ -1.92
VPS36-205ENST00000492650 C1orf226A1L170 272 aa3.02□□□□□ -1.93
VPS36-205ENST00000492650 TLR4O00206 839 aa3.02□□□□□ -1.93
VPS36-205ENST00000492650 CLDN4O14493 209 aa3.02□□□□□ -1.93
VPS36-205ENST00000492650 PTGESO14684 152 aa3.02□□□□□ -1.93
VPS36-205ENST00000492650 CTAGE5O15320 804 aa3.02□□□□□ -1.93
VPS36-205ENST00000492650 PRAMEF11O60813 436 aa3.02□□□□□ -1.93
VPS36-205ENST00000492650 CRLF1O75462 422 aa3.02□□□□□ -1.93
VPS36-205ENST00000492650 CREG1O75629 220 aa3.02□□□□□ -1.93
VPS36-205ENST00000492650 GLCEO94923 617 aa3.02□□□□□ -1.93
VPS36-205ENST00000492650 PGLSO95336 258 aa3.02□□□□□ -1.93
VPS36-205ENST00000492650 CXCL10P02778 98 aa3.02□□□□□ -1.93
VPS36-205ENST00000492650 PGK2P07205 417 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms