RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 OR7A17O14581 309 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 GMNNO75496 209 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 PRSS23O95084 383 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 EML2O95834 649 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 GGT1P19440 569 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 JAK1P23458 1154 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 AP5B1Q2VPB7 878 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 PEAR1Q5VY43 1037 aaPredicted RBP21.89■■□□□ 1.1
USF3-203ENST00000491165 METRNLQ641Q3 311 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 OR8J3Q8NGG0 315 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 TMEM159Q96B96 161 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 HSPBAP1Q96EW2 488 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 HBEGFQ99075 208 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 TIMM29Q9BSF4 260 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 OSGEPL1Q9H4B0 414 aa21.89■■□□□ 1.1
USF3-203ENST00000491165 UPK1AO00322 258 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 ANKRD28O15084 1053 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 OTCP00480 354 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 DGKAP23743 735 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 YAP1P46937 504 aaKnown RBP21.89■■□□□ 1.09
USF3-203ENST00000491165 DGKQP52824 942 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 CHRNB3Q05901 458 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 DMPKQ09013 629 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 TCF15Q12870 199 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 DAG1Q14118 895 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 C18orf21Q32NC0 220 aaPredicted RBP21.89■■□□□ 1.09
USF3-203ENST00000491165 SYTL3Q4VX76 610 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 TMEM26Q6ZUK4 368 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 SYT12Q8IV01 421 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 PHACTR4Q8IZ21 702 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 TMBIM1Q969X1 311 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 THAP11Q96EK4 314 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 OR52A5Q9H2C5 316 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 KLHL42Q9P2K6 505 aa21.89■■□□□ 1.09
USF3-203ENST00000491165 DNMT3AQ9Y6K1 912 aaPredicted RBP21.89■■□□□ 1.09
USF3-203ENST00000491165 HMOX2P30519 316 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 C1orf61Q13536 156 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 NEDD8Q15843 81 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 TTLL9Q3SXZ7 439 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 ZIK1Q3SY52 487 aaPredicted RBP21.88■■□□□ 1.09
USF3-203ENST00000491165 SBSNQ6UWP8 590 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 DCP2Q8IU60 420 aaKnown RBP21.88■■□□□ 1.09
USF3-203ENST00000491165 SLC22A15Q8IZD6 547 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 CHCHD4Q8N4Q1 142 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 CNDP2Q96KP4 475 aaKnown RBP21.88■■□□□ 1.09
USF3-203ENST00000491165 MUS81Q96NY9 551 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 RHBDL2Q9NX52 303 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 TMEM9Q9P0T7 183 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 SNX11Q9Y5W9 270 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 SH3PXD2BA1X283 911 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 KPNA5O15131 536 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 NOL3O60936 208 aaKnown RBP21.88■■□□□ 1.09
USF3-203ENST00000491165 KATNA1O75449 491 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 KCNH1O95259 989 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 CPNE6O95741 557 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 CSF2P04141 144 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 JUNDP17535 347 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 C16orf72Q14CZ0 275 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 ABRAXAS2Q15018 415 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 ZNF773Q6PK81 442 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 SFTPA2Q8IWL1 248 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 CLEC4FQ8N1N0 589 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 PDPRQ8NCN5 879 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 PRSS33Q8NF86 280 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 MIPOL1Q8TD10 442 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 GLMNQ92990 594 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 ABTB1Q969K4 478 aaPredicted RBP21.88■■□□□ 1.09
USF3-203ENST00000491165 PPP3R2Q96LZ3 170 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 CCDC115Q96NT0 180 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 LRRC61Q9BV99 259 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 PRDM8Q9NQV8 689 aa21.88■■□□□ 1.09
USF3-203ENST00000491165 CFAP20Q9Y6A4 193 aaKnown RBP21.88■■□□□ 1.09
USF3-203ENST00000491165 FFAR2O15552 330 aa21.87■■□□□ 1.09
USF3-203ENST00000491165 RSL1D1O76021 490 aaKnown RBP21.87■■□□□ 1.09
USF3-203ENST00000491165 TNFP01375 233 aa21.87■■□□□ 1.09
USF3-203ENST00000491165 ALPLP05186 524 aa21.87■■□□□ 1.09
USF3-203ENST00000491165 THRBP10828 461 aa21.87■■□□□ 1.09
USF3-203ENST00000491165 NME1P15531 152 aaKnown RBP21.87■■□□□ 1.09
USF3-203ENST00000491165 NUBP1P53384 320 aa21.87■■□□□ 1.09
USF3-203ENST00000491165 RFTN2Q52LD8 501 aaPredicted RBP21.87■■□□□ 1.09
USF3-203ENST00000491165 PRRT3Q5FWE3 981 aa21.87■■□□□ 1.09
USF3-203ENST00000491165 SKA2Q8WVK7 121 aaPredicted RBP21.87■■□□□ 1.09
USF3-203ENST00000491165 ING2Q9H160 280 aa21.87■■□□□ 1.09
USF3-203ENST00000491165 SMOC1Q9H4F8 434 aa21.87■■□□□ 1.09
USF3-203ENST00000491165 IPPKQ9H8X2 491 aa21.87■■□□□ 1.09
USF3-203ENST00000491165 TRNAU1APQ9NX07 287 aaKnown RBP21.87■■□□□ 1.09
USF3-203ENST00000491165 TBC1D29Q9UFV1 150 aa21.87■■□□□ 1.09
USF3-203ENST00000491165 APOBEC3BQ9UH17 382 aaKnown RBP21.87■■□□□ 1.09
USF3-203ENST00000491165 NEUROG3Q9Y4Z2 214 aa21.87■■□□□ 1.09
USF3-203ENST00000491165 PCDH15Q96QU1 1955 aa21.87■■□□□ 1.09
USF3-203ENST00000491165 H3BM21 787 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 TMX2-CTNND1H3BSU7 103 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 SLC34A2O95436 690 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 HPRP00739 348 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 GNSP15586 552 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 EEF1B2P24534 225 aaKnown RBP21.86■■□□□ 1.09
USF3-203ENST00000491165 ELK4P28324 431 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 C21orf59P57076 290 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 ABRQ12979 859 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 TRAF3Q13114 568 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms