RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 CHDHQ8NE62 594 aaPredicted RBP7.69□□□□□ -1.18
USP39-216ENST00000490193 C16orf52Q8NHV5 167 aa7.69□□□□□ -1.18
USP39-216ENST00000490193 TM4SF19Q96DZ7 209 aa7.69□□□□□ -1.18
USP39-216ENST00000490193 TCF12Q99081 682 aa7.69□□□□□ -1.18
USP39-216ENST00000490193 PKP4Q99569 1192 aa7.69□□□□□ -1.18
USP39-216ENST00000490193 ZNF559Q9BR84 538 aa7.69□□□□□ -1.18
USP39-216ENST00000490193 FAM129AQ9BZQ8 928 aa7.69□□□□□ -1.18
USP39-216ENST00000490193 TP63Q9H3D4 680 aaPredicted RBP7.69□□□□□ -1.18
USP39-216ENST00000490193 LANCL2Q9NS86 450 aa7.69□□□□□ -1.18
USP39-216ENST00000490193 TMEM184CQ9NVA4 438 aa7.69□□□□□ -1.18
USP39-216ENST00000490193 HCN3Q9P1Z3 774 aa7.69□□□□□ -1.18
USP39-216ENST00000490193 RNF6Q9Y252 685 aa7.69□□□□□ -1.18
USP39-216ENST00000490193 KLF13Q9Y2Y9 288 aaPredicted RBP7.69□□□□□ -1.18
USP39-216ENST00000490193 HRH3Q9Y5N1 445 aa7.69□□□□□ -1.18
USP39-216ENST00000490193 NSD1Q96L73 2696 aaPredicted RBP7.68□□□□□ -1.18
USP39-216ENST00000490193 A0A1B0GTH9 108 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 TCRBV7S2A1N4TA0A589 114 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 GRID2IPA4D2P6 1211 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 NKX2-6A6NCS4 301 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 OR2W5A6NFC9 320 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 MIF4GDA9UHW6 222 aaKnown RBP7.68□□□□□ -1.18
USP39-216ENST00000490193 E7EVH7 732 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 H7BY64 318 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 GFYI3L273 518 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 SGK494L7N484 410 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 NDC80O14777 642 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 PTMAP06454 111 aaKnown RBP7.68□□□□□ -1.18
USP39-216ENST00000490193 TPOP07202 933 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 IL1RNP18510 177 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 TFEBP19484 476 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 KLK2P20151 261 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 CYB561P49447 251 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 ST13P50502 369 aaKnown RBP7.68□□□□□ -1.18
USP39-216ENST00000490193 HLCSP50747 726 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 MLF1P58340 268 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 KCNJ11Q14654 390 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 NSDHLQ15738 373 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 CMPK2Q5EBM0 449 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 ACSBG2Q5FVE4 666 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 MRNIPQ6NTE8 343 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 CEP128Q6ZU80 1094 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 ADCK2Q7Z695 626 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 TMEM200AQ86VY9 491 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 PDSS2Q86YH6 399 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 UBL4BQ8N7F7 174 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 ZFP62Q8NB50 900 aaPredicted RBP7.68□□□□□ -1.18
USP39-216ENST00000490193 CAMKVQ8NCB2 501 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 PPFIBP2Q8ND30 876 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 RND1Q92730 232 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 TMEM125Q96AQ2 219 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 PRAP1Q96NZ9 151 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 FRMD8P1Q9BZ68 369 aaPredicted RBP7.68□□□□□ -1.18
USP39-216ENST00000490193 IL22Q9GZX6 179 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 CDCP1Q9H5V8 836 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 ANKHQ9HCJ1 492 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 KCNJ16Q9NPI9 418 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 EIF2B3Q9NR50 452 aaKnown RBP7.68□□□□□ -1.18
USP39-216ENST00000490193 DLL4Q9NR61 685 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 RAB6BQ9NRW1 208 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 KLHL42Q9P2K6 505 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 GALPQ9UBC7 116 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 SLC22A7Q9Y694 548 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 DUSP10Q9Y6W6 482 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 ABCA4P78363 2273 aa7.68□□□□□ -1.18
USP39-216ENST00000490193 DNAJC13O75165 2243 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 ZNF407Q9C0G0 2248 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 VPS13CQ709C8 3753 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 FAM90A27PA6NNH2 459 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 KLRC4-KLRK1H3BQV0 150 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 AP3B1O00203 1094 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 TFECO14948 347 aaPredicted RBP7.67□□□□□ -1.18
USP39-216ENST00000490193 PFDN6O15212 129 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 LIASO43766 372 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 KLK8O60259 260 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 PRMT3O60678 531 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 RDH16O75452 317 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 APRTP07741 180 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 MPC1LP0DKB6 136 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 FOSL1P15407 271 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 CHRM3P20309 590 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 OGNP20774 298 aaKnown RBP7.67□□□□□ -1.18
USP39-216ENST00000490193 NMBRP28336 390 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 IMPA1P29218 277 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 FMO4P31512 558 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 NPY2RP49146 381 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 MEOX1P50221 254 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 CLCN7P51798 805 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 ITGA8P53708 1063 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 OR4D2P58180 307 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 MEF2AQ02078 507 aaPredicted RBP7.67□□□□□ -1.18
USP39-216ENST00000490193 ACTN3Q08043 901 aaPredicted RBP7.67□□□□□ -1.18
USP39-216ENST00000490193 TSTA3Q13630 321 aaPredicted RBP7.67□□□□□ -1.18
USP39-216ENST00000490193 RPS6KA1Q15418 735 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 EMC4Q5J8M3 183 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 MEI1Q5TIA1 1274 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 ARHGAP11AQ6P4F7 1023 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 ACAD11Q709F0 780 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 SDCCAG8Q86SQ7 713 aaPredicted RBP7.67□□□□□ -1.18
USP39-216ENST00000490193 REXO1L1PQ8IX06 675 aa7.67□□□□□ -1.18
USP39-216ENST00000490193 CLYBLQ8N0X4 340 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms