RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 LOXL4Q96JB6 756 aa20.69■□□□□ 0.9
SMC4-221ENST00000489573 RAB3IPQ96QF0 476 aaPredicted RBP20.69■□□□□ 0.9
SMC4-221ENST00000489573 KLHL25Q9H0H3 589 aa20.69■□□□□ 0.9
SMC4-221ENST00000489573 CLMPQ9H6B4 373 aa20.69■□□□□ 0.9
SMC4-221ENST00000489573 NDE1Q9NXR1 346 aa20.69■□□□□ 0.9
SMC4-221ENST00000489573 A0A1W2PP18 115 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 GNG14A0A1W2PPG7 69 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 PLPP1O14494 284 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 ARHGAP33O14559 1287 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 PRMT3O60678 531 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 EPN2O95208 641 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 SYPP08247 313 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 GLB1P16278 677 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 ASMTP46597 345 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 NUBP1P53384 320 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 TIGD2Q4W5G0 525 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 TMEM35AQ53FP2 167 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 IRGCQ6NXR0 463 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 DSELQ8IZU8 1212 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 PCYOX1LQ8NBM8 494 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 OR4C6Q8NH72 309 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 MCUR1Q96AQ8 359 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 THAP11Q96EK4 314 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 SEMA6CQ9H3T2 930 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 MCM8Q9UJA3 840 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 SNRNP200O75643 2136 aaKnown RBP20.68■□□□□ 0.9
SMC4-221ENST00000489573 WDFY4Q6ZS81 3184 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 LRIT2A6NDA9 550 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 CFLARO15519 480 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 CTSVO60911 334 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 PRPS1L1P21108 318 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 CDH3P22223 829 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 HNRNPH1P31943 449 aaKnown RBP20.68■□□□□ 0.9
SMC4-221ENST00000489573 MPLP40238 635 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 PPM1FP49593 454 aaPredicted RBP20.68■□□□□ 0.9
SMC4-221ENST00000489573 ZNF763Q0D2J5 394 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 FBXO42Q6P3S6 717 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 RETREG3Q86VR2 466 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 VPS33AQ96AX1 596 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 RGMAQ96B86 450 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 EGLN2Q96KS0 407 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 TMEM74Q96NL1 305 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 REXO4Q9GZR2 422 aaKnown RBP20.68■□□□□ 0.9
SMC4-221ENST00000489573 SYNPO2LQ9H987 977 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 LEF1Q9UJU2 399 aaPredicted RBP20.68■□□□□ 0.9
SMC4-221ENST00000489573 PILRAQ9UKJ1 303 aa20.68■□□□□ 0.9
SMC4-221ENST00000489573 EEDO75530 441 aaKnown RBP20.67■□□□□ 0.9
SMC4-221ENST00000489573 STATHP02808 62 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 KLK1P06870 262 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 ALDH4A1P30038 563 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 GPR3P46089 330 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 C21orf58P58505 322 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 NR1D2Q14995 579 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 ADPRMQ3LIE5 342 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 HACD2Q6Y1H2 254 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 RNF44Q7L0R7 432 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 PAGE2Q7Z2X7 111 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 VN1R4Q7Z5H5 301 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 ASPGQ86U10 573 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 RIMKLAQ8IXN7 391 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 DEFB107AQ8IZN7 70 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 ARHGAP24Q8N264 748 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 CDC26Q8NHZ8 85 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 UTP4Q969X6 686 aaKnown RBP20.67■□□□□ 0.9
SMC4-221ENST00000489573 QRFPRQ96P65 431 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 FCRL4Q96PJ5 515 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 OR2A5Q96R48 311 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 ZFYVE21Q9BQ24 234 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 ZNF717Q9BY31 904 aaPredicted RBP20.67■□□□□ 0.9
SMC4-221ENST00000489573 RAB33BQ9H082 229 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 EPB41L1Q9H4G0 881 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 PADI4Q9UM07 663 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 MAPRE3Q9UPY8 281 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 PCDHGA5Q9Y5G8 931 aa20.67■□□□□ 0.9
SMC4-221ENST00000489573 PCDH15Q96QU1 1955 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 A0A0J9YVX5 310 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 ASPDHA6ND91 283 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 TRIM38O00635 465 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 LRATO95237 230 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 IL6P05231 212 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 BSGP35613 385 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 PGM1P36871 562 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 HYAL2Q12891 473 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 HKDC1Q2TB90 917 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 FAM174BQ3ZCQ3 159 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 TOR1AIP1Q5JTV8 583 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 SPANXN4Q5MJ08 99 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 RIPOR1Q6ZS17 1223 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 NUDT13Q86X67 352 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 PGAM4Q8N0Y7 254 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 C19orf47Q8N9M1 422 aaKnown RBP20.66■□□□□ 0.9
SMC4-221ENST00000489573 NT5CQ8TCD5 201 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 NUDT8Q8WV74 236 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 SLC13A3Q8WWT9 602 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 STARD8Q92502 1023 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 TESCQ96BS2 214 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 ROPN1LQ96C74 230 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 TRAPPC9Q96Q05 1148 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 SORBS1Q9BX66 1292 aaKnown RBP20.66■□□□□ 0.9
SMC4-221ENST00000489573 AICDAQ9GZX7 198 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms