RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 LRRC10BA6NIK2 292 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 KIR3DP1A8MWS1 328 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 H7C0S8 307 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 QSOX1O00391 747 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 PHF1O43189 567 aaPredicted RBP8.54□□□□□ -1.04
SSBP1-212ENST00000489378 OR1I1O60431 355 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 VPS26AO75436 327 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 GPC4O75487 556 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 NID1P14543 1247 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 ZFXP17010 805 aaPredicted RBP8.54□□□□□ -1.04
SSBP1-212ENST00000489378 BMP5P22003 454 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 GEMP55040 296 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 RHAGQ02094 409 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 NSDHLQ15738 373 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 TYSND1Q2T9J0 566 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 FBXL19-AS1Q494R0 122 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 CATSPEREQ5SY80 951 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 DENND5AQ6IQ26 1287 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 PACS1Q6VY07 963 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 SEM1Q6ZVN7 128 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 SLC13A5Q86YT5 568 aaPredicted RBP8.54□□□□□ -1.04
SSBP1-212ENST00000489378 ULK2Q8IYT8 1036 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 CYP4Z2PQ8N1L4 340 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 NAXEQ8NCW5 288 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 HMGCLL1Q8TB92 370 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 KIAA1191Q96A73 305 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 PERPQ96FX8 193 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 C19orf43Q9BQ61 176 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 YIPF4Q9BSR8 244 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 RAB11FIP5Q9BXF6 653 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 RBCK1Q9BYM8 510 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 TRMT1Q9NXH9 659 aaKnown RBP8.54□□□□□ -1.04
SSBP1-212ENST00000489378 RUVBL2Q9Y230 463 aaKnown RBP8.54□□□□□ -1.04
SSBP1-212ENST00000489378 EML6Q6ZMW3 1958 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 USF3Q68DE3 2245 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 FEZF1A0PJY2 475 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 MBD3L4A6NDZ8 208 aaPredicted RBP8.54□□□□□ -1.04
SSBP1-212ENST00000489378 OR51F1A6NGY5 319 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 MBD3L5A6NJ08 208 aaPredicted RBP8.54□□□□□ -1.04
SSBP1-212ENST00000489378 IQCF5A8MTL0 148 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 H0YIG0 161 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 SGK494L7N484 410 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 CDC123O75794 336 aaPredicted RBP8.54□□□□□ -1.04
SSBP1-212ENST00000489378 ANXA9O76027 345 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 IFNA2P01563 188 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 KRT1P04264 644 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 CELA3AP09093 270 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 OR56A5P0C7T3 313 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 FAM157BP0CG42 384 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 ADH6P28332 368 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 CMPK1P30085 196 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 OR4D2P58180 307 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 PLGLB1Q02325 96 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 ITIH4Q14624 930 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 TRILQ7L0X0 811 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 VSIG1Q86XK7 387 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 PLD3Q8IV08 490 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 RERGQ96A58 199 aaPredicted RBP8.54□□□□□ -1.04
SSBP1-212ENST00000489378 CDKN2AIPNLQ96HQ2 116 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 VAT1Q99536 393 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 PIP5K1AQ99755 562 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 GBA3Q9H227 469 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 C10orf88Q9H8K7 445 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 NLE1Q9NVX2 485 aaPredicted RBP8.54□□□□□ -1.04
SSBP1-212ENST00000489378 ALKBH4Q9NXW9 302 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 PCYOX1Q9UHG3 505 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 ACAD8Q9UKU7 415 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 NFS1Q9Y697 457 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 DUSP10Q9Y6W6 482 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 DSCAMO60469 2012 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 ROS1P08922 2347 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 A0A087X0T9 212 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 A0A1B0GVC2 190 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 FAM47E-STBD1D6RA91 191 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 CLDN4O14493 209 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 FCHO1O14526 889 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 WDR1O75083 606 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 PHF2O75151 1096 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 DNAJB6O75190 326 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 NSA2O95478 260 aaKnown RBP8.53□□□□□ -1.04
SSBP1-212ENST00000489378 C1orf105O95561 183 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 CNOT4O95628 575 aaKnown RBP8.53□□□□□ -1.04
SSBP1-212ENST00000489378 IGHG3P01860 377 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 FAM228BP0C875 321 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 IL1RNP18510 177 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 BCL6P41182 706 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 NR2C2P49116 596 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 WNT3P56703 355 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 UBE2HP62256 183 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 SPARCL1Q14515 664 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 NDUFA9Q16795 377 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 SAMD5Q5TGI4 173 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 ZNF425Q6IV72 752 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 POMZP3Q6PJE2 187 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 MFSD7Q6UXD7 560 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 ARMC10Q8N2F6 343 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 PLPP5Q8NEB5 264 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 OR2M7Q8NG81 312 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 ASZ1Q8WWH4 475 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 RAD51AP1Q96B01 352 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms