RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 UBQLN2Q9UHD9 624 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 FAF1Q9UNN5 650 aaPredicted RBP3.88□□□□□ -1.79
XRN1-213ENST00000489241 NSG2Q9Y328 171 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 TMED7Q9Y3B3 224 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 R4GN57 208 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 RGSL1A5PLK6 1076 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 FAM172BPA6NC97 362 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 BMPR1BO00238 502 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 ZNF197O14709 1029 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 SLC22A2O15244 555 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 CAVIN2O95810 425 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 TSHBP01222 138 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 KRT3P12035 628 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 SKILP12757 684 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 LIFP15018 202 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 RPA1P27694 616 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 SFNP31947 248 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 CETN2P41208 172 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 CAMLGP49069 296 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 DLX5P56178 289 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 SRP54P61011 504 aaKnown RBP3.87□□□□□ -1.79
XRN1-213ENST00000489241 RPP38P78345 283 aaKnown RBP3.87□□□□□ -1.79
XRN1-213ENST00000489241 HTD2P86397 168 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 ARL16Q0P5N6 197 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 LCP2Q13094 533 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 TSTA3Q13630 321 aaPredicted RBP3.87□□□□□ -1.79
XRN1-213ENST00000489241 GK2Q14410 553 aaPredicted RBP3.87□□□□□ -1.79
XRN1-213ENST00000489241 KRTAP27-1Q3LI81 207 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 C20orf194Q5TEA3 1177 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 UGT3A1Q6NUS8 523 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 B3GLCTQ6Y288 498 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 BTN2A1Q7KYR7 527 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 ZNF771Q7L3S4 317 aaPredicted RBP3.87□□□□□ -1.79
XRN1-213ENST00000489241 C5orf24Q7Z6I8 188 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 ADAMTSL2Q86TH1 951 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 CUZD1Q86UP6 607 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 NLRP14Q86W24 1093 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 ZNF383Q8NA42 475 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 SMYD1Q8NB12 490 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 ANKRD20A12PQ8NF67 263 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 DNASE2BQ8WZ79 361 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 LGALS12Q96DT0 336 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 ST6GAL2Q96JF0 529 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 C4orf45Q96LM5 186 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 TSGA13Q96PP4 275 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 FAM213AQ9BRX8 229 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 TMEM245Q9H330 911 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 ZDHHC6Q9H6R6 413 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 LIN28AQ9H9Z2 209 aaKnown RBP3.87□□□□□ -1.79
XRN1-213ENST00000489241 INTS10Q9NVR2 710 aaKnown RBP3.87□□□□□ -1.79
XRN1-213ENST00000489241 MIS18AQ9NYP9 233 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 TAS2R3Q9NYW6 316 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 TSPAN16Q9UKR8 245 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 DNPEPQ9ULA0 475 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 CCPG1Q9ULG6 757 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 KCNJ14Q9UNX9 436 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 TNNQ9UQP3 1299 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 ATP6V0A2Q9Y487 856 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 NPHP3Q7Z494 1330 aa3.87□□□□□ -1.79
XRN1-213ENST00000489241 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 CYSRT1A8MQ03 144 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 M0R296 226 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 FPGTO14772 594 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 PSMD3O43242 534 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 LMX1BO60663 402 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 HSF2BPO75031 334 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 IGKV3-20P01619 116 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 RAF1P04049 648 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 ATP1B1P05026 303 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 YES1P07947 543 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 MMP10P09238 476 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 NUDT17P0C025 328 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 CCDC192P0DO97 292 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 IGHV4-38-2P0DP08 117 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 CPA3P15088 417 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 AREGP15514 252 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 ACP1P24666 158 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 NR0B1P51843 470 aaKnown RBP3.86□□□□□ -1.79
XRN1-213ENST00000489241 CNN1P51911 297 aaKnown RBP3.86□□□□□ -1.79
XRN1-213ENST00000489241 HNRNPFP52597 415 aaKnown RBP3.86□□□□□ -1.79
XRN1-213ENST00000489241 CLDN17P56750 224 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 RBM39Q14498 530 aaKnown RBP3.86□□□□□ -1.79
XRN1-213ENST00000489241 TAF13Q15543 124 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 EXT1Q16394 746 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 ARMCX4Q5H9R4 360 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 TECRLQ5HYJ1 363 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 FAM76BQ5HYJ3 339 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 GSG1LQ6UXU4 331 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 TRMT1LQ7Z2T5 733 aaKnown RBP3.86□□□□□ -1.79
XRN1-213ENST00000489241 COX8CQ7Z4L0 72 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 CNPY4Q8N129 248 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 THEM5Q8N1Q8 247 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 KDM8Q8N371 416 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 TMEM185AQ8NFB2 350 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 SLC24A4Q8NFF2 622 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 OR13C3Q8NGS6 347 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 METTL21AQ8WXB1 218 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 NR4A3Q92570 626 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 SLCO4A1Q96BD0 722 aa3.86□□□□□ -1.79
XRN1-213ENST00000489241 BTBD9Q96Q07 612 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms