RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 TCEAL2Q9H3H9 227 aaPredicted RBP7.83□□□□□ -1.16
TRAPPC12-221ENST00000489032 FAM96AQ9H5X1 160 aa7.83□□□□□ -1.16
TRAPPC12-221ENST00000489032 VPS37BQ9H9H4 285 aa7.83□□□□□ -1.16
TRAPPC12-221ENST00000489032 ATXN10Q9UBB4 475 aa7.83□□□□□ -1.16
TRAPPC12-221ENST00000489032 NOX1Q9Y5S8 564 aa7.83□□□□□ -1.16
TRAPPC12-221ENST00000489032 RPS6KL1Q9Y6S9 549 aa7.83□□□□□ -1.16
TRAPPC12-221ENST00000489032 TMEM131Q92545 1883 aa7.83□□□□□ -1.16
TRAPPC12-221ENST00000489032 TP53BP1Q12888 1972 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 FAM237BA0A1B0GVD1 139 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 M0QYG6 137 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 RNASET2O00584 256 aaKnown RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 GAPDHSO14556 408 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 YY2O15391 372 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 CD3EAPO15446 510 aaKnown RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 MTX2O75431 263 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 NDUFS3O75489 264 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 USP1O94782 785 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 TTC4O95801 387 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 GOT2P00505 430 aaKnown RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 ACP5P13686 325 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 SLC2A4P14672 509 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 ZNF7P17097 686 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 ZNF8P17098 575 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 PGAM1P18669 254 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 PSMA3P25788 255 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 IVDP26440 423 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 NMBRP28336 390 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 ACTR1BP42025 376 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 NSG1P42857 185 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 MAGEA3P43357 314 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 RPL21P46778 160 aaKnown RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 TTPAP49638 278 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 DRG2P55039 364 aaKnown RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 ACTR1AP61163 376 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 MRPS25P82663 173 aaKnown RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 ACVR1Q04771 509 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 SPTAN1Q13813 2472 aaKnown RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 INSCQ1MX18 579 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 DEFB133Q30KQ1 61 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 TBC1D25Q3MII6 688 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 PDCD4Q53EL6 469 aaKnown RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 SPANXN3Q5MJ09 141 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 SPDYAQ5MJ70 313 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 DUPD1Q68J44 220 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 KIAA0930Q6ICG6 404 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 ZNF449Q6P9G9 518 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 SLC30A9Q6PML9 568 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 TMEM220Q6QAJ8 160 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 CENPUQ71F23 418 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 MPP5Q8N3R9 675 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 PDPRQ8NCN5 879 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 FAM46DQ8NEK8 389 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 OR6C4Q8NGE1 309 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 OR13J1Q8NGT2 312 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 NAF1Q96HR8 494 aaKnown RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 CNDP2Q96KP4 475 aaKnown RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 TIMM29Q9BSF4 260 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 TSSK1BQ9BXA7 367 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 C1QTNF3Q9BXJ4 246 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 FAM129AQ9BZQ8 928 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 DPEP2Q9H4A9 486 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 STN1Q9H668 368 aaKnown RBP7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 MED4Q9NPJ6 270 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 TREX1Q9NSU2 369 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 SLC2A6Q9UGQ3 507 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 GPR34Q9UPC5 381 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 MED16Q9Y2X0 877 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 PLEKHM1Q9Y4G2 1056 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 SCN8AQ9UQD0 1980 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 CABIN1Q9Y6J0 2220 aa7.82□□□□□ -1.16
TRAPPC12-221ENST00000489032 TRBV5-4A0A0C4DH59 114 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 KRTAP9-6A0A140TA67 174 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 GAGE12BA1L429 117 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 GAGE12HA6NDE8 117 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 OR51F1A6NGY5 319 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 OR2AG2A6NM03 316 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 RHPN2P1A8MT19 583 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 AGAP14A8MT82 685 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 CHUKO15111 745 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 EIF3HO15372 352 aaKnown RBP eCLIP7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 ZW10O43264 779 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 AP2A2O94973 939 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 VAPBO95292 243 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 FTH1P02794 183 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 OR56A5P0C7T3 313 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 ATP1B2P14415 290 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 CKMT2P17540 419 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 FOXN2P32314 431 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 CCR10P46092 362 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 PLTPP55058 493 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 SUMO3P55854 103 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 CLDN6P56747 220 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 POU6F2P78424 691 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 HSD11B2P80365 405 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 PDIA2Q13087 525 aaKnown RBP7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 LONRF1Q17RB8 773 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 ANKRD20A4Q4UJ75 823 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 FNBP1LQ5T0N5 605 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 HES3Q5TGS1 186 aa7.81□□□□□ -1.16
TRAPPC12-221ENST00000489032 CES3Q6UWW8 571 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms