RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 GDAP1L1Q96MZ0 367 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 ZMAT2Q96NC0 199 aaKnown RBP2.91□□□□□ -1.94
RFC4-213ENST00000489028 SLC25A23Q9BV35 468 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 TUBB1Q9H4B7 451 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 HEXA-AS1Q9H8Q6 139 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 SH3GLB2Q9NR46 395 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 FAM120CQ9NX05 1096 aaKnown RBP2.91□□□□□ -1.94
RFC4-213ENST00000489028 PKD2L2Q9NZM6 624 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 IL36AQ9UHA7 158 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 FBXL4Q9UKA2 621 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 STYXL1Q9Y6J8 313 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 IL16Q14005 1332 aa2.91□□□□□ -1.94
RFC4-213ENST00000489028 IGLV4-3A0A075B6K6 122 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 TSPY2A6NKD2 308 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 H7C0S8 307 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 TSPY3P0CV98 308 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 TSPY8P0CW00 308 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 CDC25CP30307 473 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 BTG1P62324 171 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 TSPY1Q01534 308 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 RBBP7Q16576 425 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 MS4A18Q3C1V0 323 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 FAM106AQ4KMX7 169 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 SLC25A30Q5SVS4 291 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 ARMC3Q5W041 872 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 FAM166AQ6J272 317 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 TTC27Q6P3X3 843 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 MOXD1Q6UVY6 613 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 ENPP7Q6UWV6 458 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 TIPARPQ7Z3E1 657 aaKnown RBP2.9□□□□□ -1.95
RFC4-213ENST00000489028 SH2D6Q7Z4S9 175 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 NRARPQ7Z6K4 114 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 SLC22A15Q8IZD6 547 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 NKAIN3Q8N8D7 197 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 OR52B6Q8NGF0 335 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 SSC4DQ8WTU2 575 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.9□□□□□ -1.95
RFC4-213ENST00000489028 RPP25Q9BUL9 199 aaKnown RBP2.9□□□□□ -1.95
RFC4-213ENST00000489028 GTPBP2Q9BX10 602 aaKnown RBP2.9□□□□□ -1.95
RFC4-213ENST00000489028 RABEP2Q9H5N1 569 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 GPN1Q9HCN4 374 aaPredicted RBP2.9□□□□□ -1.95
RFC4-213ENST00000489028 NLGN3Q9NZ94 848 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 GIMAP2Q9UG22 337 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 POMT2Q9UKY4 750 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 RARRES3Q9UL19 164 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 TP53TG3Q9ULZ0 132 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 CCL27Q9Y4X3 112 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 SPATA31D1Q6ZQQ2 1576 aa2.9□□□□□ -1.95
RFC4-213ENST00000489028 PENKP01210 267 aaPredicted RBP2.89□□□□□ -1.95
RFC4-213ENST00000489028 ERCC2P18074 760 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 EEF1DP29692 281 aaKnown RBP2.89□□□□□ -1.95
RFC4-213ENST00000489028 RGS7P49802 495 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 ATP4BP51164 291 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 NDST2P52849 883 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 CLDN17P56750 224 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 FKBP3Q00688 224 aaKnown RBP2.89□□□□□ -1.95
RFC4-213ENST00000489028 ROR1Q01973 937 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 FCHO2Q0JRZ9 810 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 ZNF273Q14593 569 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 ZNF146Q15072 292 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 PRSS55Q6UWB4 352 aaPredicted RBP2.89□□□□□ -1.95
RFC4-213ENST00000489028 BTNL8Q6UX41 500 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 Q6ZR54 194 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 CDHR3Q6ZTQ4 885 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 SLC25A42Q86VD7 318 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 PHC2Q8IXK0 858 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 SLC39A11Q8N1S5 342 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 CCDC63Q8NA47 563 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 Q8NFD4 153 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 RPLP0P6Q8NHW5 317 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 CHURC1Q8WUH1 139 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 NSMAFQ92636 917 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 SPATA17Q96L03 361 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 RMDN2Q96LZ7 410 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 CHCHD5Q9BSY4 110 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 CCDC28BQ9BUN5 200 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 SNX25Q9H3E2 840 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 RNF121Q9H920 327 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 PILRAQ9UKJ1 303 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 NPHP3Q7Z494 1330 aa2.89□□□□□ -1.95
RFC4-213ENST00000489028 A0A1W2PPW3 197 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 A8MVM7 634 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 CCDC188H7C350 402 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 TBCAO75347 108 aaKnown RBP2.88□□□□□ -1.95
RFC4-213ENST00000489028 RECQL5O94762 991 aaPredicted RBP2.88□□□□□ -1.95
RFC4-213ENST00000489028 YES1P07947 543 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 HSP90AB1P08238 724 aaKnown RBP2.88□□□□□ -1.95
RFC4-213ENST00000489028 MYL6BP14649 208 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 EPORP19235 508 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 C4BPBP20851 252 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 PRELPP51888 382 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 RAD23AP54725 363 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 MFAP3P55082 362 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 KIAA0141Q14154 515 aaPredicted RBP2.88□□□□□ -1.95
RFC4-213ENST00000489028 TCP11X2Q5H9J9 407 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 SPANXN4Q5MJ08 99 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 DHRS11Q6UWP2 260 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 ABI3BPQ7Z7G0 1075 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 AMIGO1Q86WK6 493 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 VSIG1Q86XK7 387 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms