RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 PROCP04070 461 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 SERPINA6P08185 405 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 FURINP09958 794 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 SMIM10L1P0DMW3 83 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 EEF1DP29692 281 aaKnown RBP17.71■□□□□ 0.43
PTCD3-217ENST00000488801 OR1D4P47884 311 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 RPS15P62841 145 aaKnown RBP17.71■□□□□ 0.43
PTCD3-217ENST00000488801 IRF8Q02556 426 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 LAPTM5Q13571 262 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 SLC9A5Q14940 896 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 NDUFA9Q16795 377 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 UGT8Q16880 541 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 ADPRMQ3LIE5 342 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 XKR6Q5GH73 641 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 ADNP2Q6IQ32 1131 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 GRHL2Q6ISB3 625 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 C16orf46Q6P387 395 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 PRSS41Q7RTY9 318 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 PDSS2Q86YH6 399 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 LAS2Q8IYD9 372 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 KRT78Q8N1N4 520 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 METTL27Q8N6F8 245 aaPredicted RBP17.71■□□□□ 0.43
PTCD3-217ENST00000488801 ZSCAN1Q8NBB4 408 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 OR2Y1Q8NGV0 311 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 ZNF483Q8TF39 744 aaPredicted RBP17.71■□□□□ 0.43
PTCD3-217ENST00000488801 TTC9Q92623 222 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 PHF21BQ96EK2 531 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 SMIM10Q96HG1 83 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 ZNF304Q9HCX3 659 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 IFT80Q9P2H3 777 aaPredicted RBP17.71■□□□□ 0.43
PTCD3-217ENST00000488801 CTSFQ9UBX1 484 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 NDOR1Q9UHB4 597 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 LHX6Q9UPM6 363 aa17.71■□□□□ 0.43
PTCD3-217ENST00000488801 H0YIG0 161 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 OR7A17O14581 309 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 CTIFO43310 598 aaKnown RBP17.7■□□□□ 0.42
PTCD3-217ENST00000488801 DLX3O60479 287 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 PLIN3O60664 434 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 KATNA1O75449 491 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 CLEC3AO75596 197 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 UMODP07911 640 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 CD63P08962 238 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 PIM1P11309 404 aaPredicted RBP17.7■□□□□ 0.42
PTCD3-217ENST00000488801 KRT4P19013 534 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 CYP4F2P78329 520 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 IFFO1Q0D2I5 559 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 TRAF3Q13114 568 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 NKG7Q16617 165 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 TNFAIP8L3Q5GJ75 292 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 BEND6Q5SZJ8 279 aaPredicted RBP17.7■□□□□ 0.42
PTCD3-217ENST00000488801 ATP1A1-AS1Q5TC04 95 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 FAM69BQ5VUD6 431 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 L3MBTL4Q8NA19 623 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 NSUN5Q96P11 429 aaKnown RBP17.7■□□□□ 0.42
PTCD3-217ENST00000488801 TMEM237Q96Q45 408 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 NTMT1Q9BV86 223 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 CDC14AQ9UNH5 594 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 PADI2Q9Y2J8 665 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 MAP4K5Q9Y4K4 846 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 MAU2Q9Y6X3 613 aa17.7■□□□□ 0.42
PTCD3-217ENST00000488801 A0A0A6YYC8 382 aaPredicted RBP17.69■□□□□ 0.42
PTCD3-217ENST00000488801 TLDC2A0PJX2 215 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 G3V2L1 256 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 I3L1I5 382 aaPredicted RBP17.69■□□□□ 0.42
PTCD3-217ENST00000488801 PRPF4O43172 522 aaKnown RBP eCLIP17.69■□□□□ 0.42
PTCD3-217ENST00000488801 H2AFYO75367 372 aaKnown RBP17.69■□□□□ 0.42
PTCD3-217ENST00000488801 ITGB2P05107 769 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 IL1RNP18510 177 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 FBLP22087 321 aaKnown RBP17.69■□□□□ 0.42
PTCD3-217ENST00000488801 ATP5F1P24539 256 aaPredicted RBP17.69■□□□□ 0.42
PTCD3-217ENST00000488801 HNF4AP41235 474 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 FOXL2P58012 376 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 HERVK_113P63132 956 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 RGS1Q08116 209 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 GGTA1PQ4G0N0 100 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 PAGE2BQ5JRK9 111 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 LIPJQ5W064 366 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 PCSK4Q6UW60 755 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 C4orf33Q8N1A6 199 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 BANPQ8N9N5 519 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 ZCCHC10Q8TBK6 192 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 UTP15Q8TED0 518 aaKnown RBP17.69■□□□□ 0.42
PTCD3-217ENST00000488801 L3HYPDHQ96EM0 354 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 APOPT1Q96IL0 206 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 ZIM3Q96PE6 472 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 ERVK-6Q9BXR3 956 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 TGIF2Q9GZN2 237 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 IPPKQ9H8X2 491 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 WDR70Q9NW82 654 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 NXT1Q9UKK6 140 aaKnown RBP17.69■□□□□ 0.42
PTCD3-217ENST00000488801 CROCCQ5TZA2 2017 aa17.69■□□□□ 0.42
PTCD3-217ENST00000488801 GALR3O60755 368 aaPredicted RBP17.68■□□□□ 0.42
PTCD3-217ENST00000488801 ALOX12P18054 663 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 TAC1P20366 129 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 HNRNPH1P31943 449 aaKnown RBP17.68■□□□□ 0.42
PTCD3-217ENST00000488801 PRKAA2P54646 552 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 RHDQ02161 417 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 HERC3Q15034 1050 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 RBBP5Q15291 538 aaKnown RBP17.68■□□□□ 0.42
PTCD3-217ENST00000488801 CCDC153Q494R4 210 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms