RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CCDC43Q96MW1 224 aaKnown RBP3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 NECTIN4Q96NY8 510 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 HNRNPABQ99729 332 aaKnown RBP3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 NAPBQ9H115 298 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 C2orf40Q9H1Z8 148 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 ATP13A3Q9H7F0 1226 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 SRD5A3Q9H8P0 318 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 RAVER2Q9HCJ3 691 aaKnown RBP3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 IL1RAPL2Q9NP60 686 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 IARS2Q9NSE4 1012 aaKnown RBP3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 PANK4Q9NVE7 773 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 HACD3Q9P035 362 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 KLHL8Q9P2G9 620 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 DNAJB9Q9UBS3 223 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 LNPEPQ9UIQ6 1025 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 NOCTQ9UK39 431 aaKnown RBP3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 FBXL4Q9UKA2 621 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 IGLV7-46A0A075B6I9 117 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 TRBV4-1A0A0J9YWV2 114 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 C15orf61A6NNL5 157 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 PI4K2BG5E9Z4 385 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 SURF4O15260 269 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 KHDRBS3O75525 346 aaKnown RBP3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 BAG3O95817 575 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 IGHEP01854 428 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 F3P13726 295 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZNF26P17031 533 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 CTNNA2P26232 953 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 PSMB4P28070 264 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 MMP12P39900 470 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 SLC1A3P43003 542 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 NKX2-1P43699 371 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 GMPSP49915 693 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 RPP38P78345 283 aaKnown RBP3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 ASIC1P78348 528 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 SLC3A1Q07837 685 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 ABRQ12979 859 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 CDH18Q13634 790 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 TAB1Q15750 504 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 KBTBD12Q3ZCT8 623 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 IQCCQ4KMZ1 466 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZNF542PQ5EBM4 170 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 GLRA4Q5JXX5 417 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 ADAMTSL4-AS1Q5T5F5 129 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 ATP1A1-AS1Q5TC04 95 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 BTNL8Q6UX41 500 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 GBP6Q6ZN66 633 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 C15orf52Q6ZUT6 534 aaKnown RBP3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 ELMOD1Q8N336 334 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 TMEM99Q8N816 258 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 OR2T6Q8NHC8 308 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 OLIG1Q8TAK6 271 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 CFAP36Q96G28 342 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 CDKN2AIPNLQ96HQ2 116 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 LITAFQ99732 161 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 OPRPNQ99935 248 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 ALKBH7Q9BT30 221 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 FUT8Q9BYC5 575 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 MMADHCQ9H3L0 296 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 MED20Q9H944 212 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 GPR173Q9NS66 373 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZDHHC18Q9NUE0 388 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 PLCXD1Q9NUJ7 323 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 TEX10Q9NXF1 929 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 RNF186Q9NXI6 227 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 TRPC4Q9UBN4 977 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 POLKQ9UBT6 870 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 PILRBQ9UKJ0 227 aa3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 EXOGQ9Y2C4 368 aaKnown RBP3.28□□□□□ -1.88
HMGB1P36-201ENST00000487709 PFASO15067 1338 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 ACEP12821 1306 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 LRRD1A4D1F6 860 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 MSGN1A6NI15 193 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 KPNA7A9QM74 516 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 PRSS46E5RG02 174 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 ST8SIA3O43173 380 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 CLN5O75503 358 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 GSTA2P09210 222 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 ZNF883P0CG24 379 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 CPA3P15088 417 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 GOT1P17174 413 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 COPB2P35606 906 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 OR3A2P47893 321 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 ARHGAP1Q07960 439 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 SRSF9Q13242 221 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 GRB14Q14449 540 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 TMEM132DQ14C87 1099 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 SUSD4Q5VX71 490 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 FAAP20Q6NZ36 180 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 PTAR1Q7Z6K3 402 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 CCDC170Q8IYT3 715 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 ZNF614Q8N883 585 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 LRTM2Q8N967 370 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 UXS1Q8NBZ7 420 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 OMA1Q96E52 524 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 SGF29Q96ES7 293 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 RBM41Q96IZ5 413 aaKnown RBP3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 NDNQ99608 321 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms