RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PCMT1P22061 227 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 CLK3P49761 638 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 CRYBA2P53672 197 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 MAPK10P53779 464 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 UBE3AQ05086 875 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 MESP2Q0VG99 397 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 TSTA3Q13630 321 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 SIM2Q14190 667 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 IQCCQ4KMZ1 466 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 FNDC3BQ53EP0 1204 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 C9orf64Q5T6V5 341 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 COMMD6Q7Z4G1 85 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 ETFBKMTQ8IXQ9 262 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 LRRC56Q8IYG6 542 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 GOT1L1Q8NHS2 421 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 PHOSPHO2Q8TCD6 241 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 OR8D1Q8WZ84 308 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 RSPRY1Q96DX4 576 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 TPD52L3Q96J77 140 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 ZNF514Q96K75 400 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 C7orf34Q96L11 122 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 LINC00615Q96LM1 132 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 TRIM39Q9HCM9 518 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 ADPRHL2Q9NX46 363 aa17.29■□□□□ 0.36
PDLIM7-207ENST00000486828 LRRK1Q38SD2 2015 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 A0A0J9YVX5 310 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 EDDM13A0A1B0GTR0 161 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 C17orf113A0A1B0GUU1 675 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 PIPSLA2A3N6 862 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 HLA-EP13747 358 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 GALK1P51570 392 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 KCNJ10P78508 379 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 IL1RL1Q01638 556 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 TAP2Q03519 686 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 TEAD4Q15561 434 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 HIST2H2ACQ16777 129 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 HNRNPA1L2Q32P51 320 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 HIST2H2AA3Q6FI13 130 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 ARMCX6Q7L4S7 300 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 TRMT11Q7Z4G4 463 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 NAGSQ8N159 534 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 KIAA1958Q8N8K9 716 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 THUMPD1Q9NXG2 353 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 PSME2Q9UL46 239 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 PCDHGB1Q9Y5G3 927 aa17.28■□□□□ 0.36
PDLIM7-207ENST00000486828 PTGES3LE9PB15 166 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 SUV39H1O43463 412 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 PAPLNO95428 1278 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 CYP4B1P13584 511 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 ZNF182P17025 639 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 JUNDP17535 347 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 DPTQ07507 201 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 CAMK1Q14012 370 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 SHHQ15465 462 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 FAHD1Q6P587 224 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 ZNF547Q8IVP9 402 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 ZC3H7AQ8IWR0 971 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 C11orf65Q8NCR3 313 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 SLC5A11Q8WWX8 675 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 TANKQ92844 425 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 MAL2Q969L2 176 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 DPEP2Q9H4A9 486 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 ATAD3AQ9NVI7 634 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 KIF17Q9P2E2 1029 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 NDRG4Q9ULP0 352 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 GMPPBQ9Y5P6 360 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 NUP214P35658 2090 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 KIAA1549LQ6ZVL6 1849 aa17.27■□□□□ 0.36
PDLIM7-207ENST00000486828 NUP210Q8TEM1 1887 aaPredicted RBP17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 XPNPEP2O43895 674 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 LZTS3O60299 673 aaPredicted RBP17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 MMP20O60882 483 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 POP7O75817 140 aaKnown RBP17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 C9P02748 559 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 NTRK1P04629 796 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 POU2F2P09086 479 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 ADRB3P13945 408 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 SLC6A11P48066 632 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 CXCR4P61073 352 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 PDE7AQ13946 482 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 NXPE4Q6UWF7 544 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 B3GNT8Q7Z7M8 397 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 LMNTD1Q8N9Z9 388 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 TTC29Q8NA56 475 aaPredicted RBP17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 FKBP10Q96AY3 582 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 CSF3RQ99062 836 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 EPYCQ99645 322 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 APOL4Q9BPW4 351 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 DGCR6LQ9BY27 220 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 CCDC177Q9NQR7 707 aaPredicted RBP17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 KRT84Q9NSB2 600 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 PADI2Q9Y2J8 665 aa17.27■□□□□ 0.35
PDLIM7-207ENST00000486828 PCM1Q15154 2024 aa17.26■□□□□ 0.35
PDLIM7-207ENST00000486828 MUC22E2RYF6 1773 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-207ENST00000486828 TMEM229AB2RXF0 380 aa17.26■□□□□ 0.35
PDLIM7-207ENST00000486828 PLK4O00444 970 aa17.26■□□□□ 0.35
PDLIM7-207ENST00000486828 FOXD2O60548 495 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-207ENST00000486828 TGFB1P01137 390 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms