RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 DCUN1D1Q96GG9 259 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 PSMG3-AS1Q96PY0 264 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 TRAPPC9Q96Q05 1148 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 PANX3Q96QZ0 392 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 CD180Q99467 661 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 GPR21Q99679 349 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 CCM2Q9BSQ5 444 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 SLC25A23Q9BV35 468 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 NUDT9Q9BW91 350 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 C1QTNF3Q9BXJ4 246 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 SPRTNQ9H040 489 aaPredicted RBP9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 ING2Q9H160 280 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 SRMSQ9H3Y6 488 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 ALG9Q9H6U8 611 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 ZNF395Q9H8N7 513 aaPredicted RBP9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 PFDN4Q9NQP4 134 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 PNPOQ9NVS9 261 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 MARCOQ9UEW3 520 aaPredicted RBP9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 TAGLN3Q9UI15 199 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 ICKQ9UPZ9 632 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 BTRCQ9Y297 605 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 STK38LQ9Y2H1 464 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 KLHL20Q9Y2M5 609 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 PIKFYVEQ9Y2I7 2098 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 IGLV3-16A0A075B6K0 115 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 TTLL8A6PVC2 850 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 QSOX1O00391 747 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 KPNA5O15131 536 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 ZNF749O43361 778 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 ZBTB14O43829 449 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 CNOT3O75175 753 aaKnown RBP9□□□□□ -0.97
TMEM39A-208ENST00000486159 SEMA7AO75326 666 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 FGF4P08620 206 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 T-ENOLP0DO92 83 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 ESRRAP11474 423 aaPredicted RBP9□□□□□ -0.97
TMEM39A-208ENST00000486159 EZRP15311 586 aaKnown RBP9□□□□□ -0.97
TMEM39A-208ENST00000486159 CHRM3P20309 590 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 ARRB2P32121 409 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 GMPRP36959 345 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 SLC9A5Q14940 896 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 CDKL4Q5MAI5 379 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 CTSL3PQ5NE16 218 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 ZNF678Q5SXM1 525 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 ZNF385CQ66K41 422 aaPredicted RBP9□□□□□ -0.97
TMEM39A-208ENST00000486159 PTRHD1Q6GMV3 140 aaKnown RBP9□□□□□ -0.97
TMEM39A-208ENST00000486159 KLHL35Q6PF15 583 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 PAQR3Q6TCH7 311 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 ADAMTSL2Q86TH1 951 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 SYVN1Q86TM6 617 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 KMT5CQ86Y97 462 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 SYTL1Q8IYJ3 562 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 FAM26EQ8N5C1 309 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 C2orf73Q8N5S3 287 aaPredicted RBP9□□□□□ -0.97
TMEM39A-208ENST00000486159 ZNF781Q8N8C0 355 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 Q8NA96 180 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 FLVCR1-AS1Q8TAF5 88 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 CPT1CQ8TCG5 803 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 CD200R1Q8TD46 325 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 CLIP3Q96DZ5 547 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 CMTM5Q96DZ9 223 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 C19orf60Q96EN9 201 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 PTCD3Q96EY7 689 aaKnown RBP9□□□□□ -0.97
TMEM39A-208ENST00000486159 FCRL4Q96PJ5 515 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 ATOH8Q96SQ7 321 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 COPS8Q99627 209 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 CCDC106Q9BWC9 280 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 GPR87Q9BY21 358 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 NMUR2Q9GZQ4 415 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 C1orf21Q9H246 121 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 MMADHCQ9H3L0 296 aaPredicted RBP9□□□□□ -0.97
TMEM39A-208ENST00000486159 ACSS2Q9NR19 701 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9□□□□□ -0.97
TMEM39A-208ENST00000486159 ZDHHC3Q9NYG2 299 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 ACTR10Q9NZ32 417 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 TCFL5Q9UL49 500 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 RNF112Q9ULX5 631 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 MED16Q9Y2X0 877 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 TNPO3Q9Y5L0 923 aaKnown RBP9□□□□□ -0.97
TMEM39A-208ENST00000486159 COLEC10Q9Y6Z7 277 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 SHANK1Q9Y566 2161 aa9□□□□□ -0.97
TMEM39A-208ENST00000486159 SNRNP200O75643 2136 aaKnown RBP8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 NBPF19A0A087WUL8 3843 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 KRT87PA6NCN2 255 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 IQCF5A8MTL0 148 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 CFAP99D6REC4 459 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 H3BMH7 237 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 OR1I1O60431 355 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 DIAPH2O60879 1101 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 AP2A2O94973 939 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 MLYCDO95822 493 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 ENO3P13929 434 aaPredicted RBP8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 UGT2B7P16662 529 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 PEBP1P30086 187 aaKnown RBP8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 GABRA4P48169 554 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 CLCN7P51798 805 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 PGDP52209 483 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 ALDH18A1P54886 795 aaKnown RBP8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 MRPL49Q13405 166 aaKnown RBP8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 ATP1A4Q13733 1029 aa8.99□□□□□ -0.97
TMEM39A-208ENST00000486159 BOP1Q14137 746 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms