RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 ACOT13Q9NPJ3 140 aa16.9■□□□□ 0.3
TNXB-205ENST00000486148 SPG21Q9NZD8 308 aa16.9■□□□□ 0.3
TNXB-205ENST00000486148 STOX2Q9P2F5 926 aaPredicted RBP16.9■□□□□ 0.3
TNXB-205ENST00000486148 C1orf226A1L170 272 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 TMEM229AB2RXF0 380 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 PCDHGA12O60330 932 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 BDKRB1P46663 353 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 C21orf58P58505 322 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 NPRL3Q12980 569 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 VEZF1Q14119 521 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 SLAIN1Q8ND83 568 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 APH1BQ8WW43 257 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 ZNF689Q96CS4 500 aaPredicted RBP16.89■□□□□ 0.29
TNXB-205ENST00000486148 DKK3Q9UBP4 350 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 NEDD8-MDP1E9PL57 170 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 M0R3G1 203 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 PSIP1O75475 530 aaKnown RBP16.89■□□□□ 0.29
TNXB-205ENST00000486148 NTRK1P04629 796 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 CTSAP10619 480 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 CHRNB1P11230 501 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 NCS1P62166 190 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 CPTPQ5TA50 214 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 TMEM236Q5W0B7 351 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 GRHL2Q6ISB3 625 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 Q6ZPB1 254 aaPredicted RBP16.89■□□□□ 0.29
TNXB-205ENST00000486148 GPR156Q8NFN8 814 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 CLP1Q92989 425 aaKnown RBP16.89■□□□□ 0.29
TNXB-205ENST00000486148 VMP1Q96GC9 406 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 BCL7BQ9BQE9 202 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 RIOK2Q9BVS4 552 aaKnown RBP16.89■□□□□ 0.29
TNXB-205ENST00000486148 NECTIN3Q9NQS3 549 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 ZNF451Q9Y4E5 1061 aa16.89■□□□□ 0.29
TNXB-205ENST00000486148 H0YIV9 168 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 TSPAN6O43657 245 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 GCM2O75603 506 aaPredicted RBP16.88■□□□□ 0.29
TNXB-205ENST00000486148 NADKO95544 446 aaPredicted RBP16.88■□□□□ 0.29
TNXB-205ENST00000486148 C9P02748 559 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 ANXA4P09525 319 aaPredicted RBP16.88■□□□□ 0.29
TNXB-205ENST00000486148 TGFBR1P36897 503 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 CTSCP53634 463 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 CAMK2GQ13555 558 aaPredicted RBP16.88■□□□□ 0.29
TNXB-205ENST00000486148 KCNC3Q14003 757 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.88■□□□□ 0.29
TNXB-205ENST00000486148 TSEN54Q7Z6J9 526 aaKnown RBP16.88■□□□□ 0.29
TNXB-205ENST00000486148 AKAP14Q86UN6 197 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 RPL3LQ92901 407 aaKnown RBP16.88■□□□□ 0.29
TNXB-205ENST00000486148 PITX2Q99697 317 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 PRRC2BQ5JSZ5 2229 aaKnown RBP16.88■□□□□ 0.29
TNXB-205ENST00000486148 LRG1P02750 347 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 LCKP06239 509 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 CXCR2P25025 360 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 CASP9P55211 416 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 POLR2LP62875 67 aaKnown RBP16.88■□□□□ 0.29
TNXB-205ENST00000486148 DEFB103AP81534 67 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 ZNF33BQ06732 778 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 RGNQ15493 299 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 AHSA2Q719I0 299 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 FAM124AQ86V42 546 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 ENTHD1Q8IYW4 607 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 NAGSQ8N159 534 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 TP53INP1Q96A56 240 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 SAMD11Q96NU1 681 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 BTBD2Q9BX70 525 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 PRM3Q9NNZ6 103 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 TMEM184CQ9NVA4 438 aa16.88■□□□□ 0.29
TNXB-205ENST00000486148 E9PQ18 207 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 LILRB3O75022 631 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 SLC16A8O95907 504 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 IDSP22304 550 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 RRM2P31350 389 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 VIPR1P32241 457 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 ST13P50502 369 aaKnown RBP16.87■□□□□ 0.29
TNXB-205ENST00000486148 NPAS3Q8IXF0 933 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 OR7G1Q8NGA0 311 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 DYNC2LI1Q8TCX1 351 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 DNASE1L2Q92874 299 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 TXNDC15Q96J42 360 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 PCDH10Q9P2E7 1040 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 BTNL2Q9UIR0 455 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 CXorf51AA0A1B0GTR3 108 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 PCDH7O60245 1069 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 ZNF30P17039 623 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 TNFRSF1BP20333 461 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 IMPA1P29218 277 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 CCR2P41597 374 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 SLC13A2Q13183 592 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 PROX2Q3B8N5 592 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 SYTL3Q4VX76 610 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 GPR153Q6NV75 609 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 UTS2BQ765I0 119 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 PRSS48Q7RTY5 328 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 RASGEF1AQ8N9B8 481 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 OR7G3Q8NG95 312 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 HUS1BQ8NHY5 278 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 SIGLEC11Q96RL6 698 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 PKP4Q99569 1192 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 RC3H2Q9HBD1 1191 aaKnown RBP16.87■□□□□ 0.29
TNXB-205ENST00000486148 ZNF229Q9UJW7 825 aa16.87■□□□□ 0.29
TNXB-205ENST00000486148 EXO1Q9UQ84 846 aaKnown RBP16.87■□□□□ 0.29
TNXB-205ENST00000486148 PCDHGA6Q9Y5G7 932 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms