RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ZNF441Q8N8Z8 693 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 LEMD2Q8NC56 503 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 GMCL1P1Q8NEA9 526 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 OR56B1Q8NGI3 324 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 OR4A16Q8NH70 328 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 CHURC1Q8WUH1 139 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 HAS2Q92819 552 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 LGALS12Q96DT0 336 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 RBM41Q96IZ5 413 aaKnown RBP4.12□□□□□ -1.75
VPS13A-211ENST00000484581 ASCL2Q99929 193 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 CCDC3Q9BQI4 270 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 POLR3CQ9BUI4 534 aaPredicted RBP4.12□□□□□ -1.75
VPS13A-211ENST00000484581 LRRC2Q9BYS8 371 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 TRPV6Q9H1D0 765 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 C5orf66Q9H5L9 145 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 PELI2Q9HAT8 420 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 RAVER2Q9HCJ3 691 aaKnown RBP4.12□□□□□ -1.75
VPS13A-211ENST00000484581 SDR39U1Q9NRG7 319 aaPredicted RBP4.12□□□□□ -1.75
VPS13A-211ENST00000484581 FAM212BQ9NTI7 297 aaPredicted RBP4.12□□□□□ -1.75
VPS13A-211ENST00000484581 ANKMY1Q9P2S6 941 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 SLC12A6Q9UHW9 1150 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 POU2F3Q9UKI9 436 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 DUSP12Q9UNI6 340 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 EXOC7Q9UPT5 735 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 NSG2Q9Y328 171 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 U3KQV3 271 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 ASPDHA6ND91 283 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 PRR23D1E9PI22 279 aaPredicted RBP4.11□□□□□ -1.75
VPS13A-211ENST00000484581 F8WDY8 70 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 M0R296 226 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 CLN5O75503 358 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 STBD1O95210 358 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 OR6A2O95222 327 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 CRYABP02511 175 aaKnown RBP4.11□□□□□ -1.75
VPS13A-211ENST00000484581 ALPLP05186 524 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 NUDT17P0C025 328 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 PRR23D2P0DMB1 279 aaPredicted RBP4.11□□□□□ -1.75
VPS13A-211ENST00000484581 GOT1P17174 413 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 EFNA1P20827 205 aaPredicted RBP4.11□□□□□ -1.75
VPS13A-211ENST00000484581 SRD5A2P31213 254 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 CETN2P41208 172 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 NSFP46459 744 aaKnown RBP4.11□□□□□ -1.75
VPS13A-211ENST00000484581 NR2C2P49116 596 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 NR0B1P51843 470 aaKnown RBP4.11□□□□□ -1.75
VPS13A-211ENST00000484581 SSTP61278 116 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 IRX4P78413 519 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 CCZ1BP86790 482 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 CCZ1P86791 482 aaPredicted RBP4.11□□□□□ -1.75
VPS13A-211ENST00000484581 SCGB2A2Q13296 93 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 OPCMLQ14982 345 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 TAF13Q15543 124 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 CEBPEQ15744 281 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 RIPPLY2Q5TAB7 128 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 CES4AQ5XG92 561 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 RCOR2Q8IZ40 523 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 ZNF444Q8N0Y2 327 aaPredicted RBP4.11□□□□□ -1.75
VPS13A-211ENST00000484581 MAPKAPK5-AS1Q8N8E1 139 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 SMYD1Q8NB12 490 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 FBXO30Q8TB52 745 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 DQX1Q8TE96 717 aaKnown RBP4.11□□□□□ -1.75
VPS13A-211ENST00000484581 RBM18Q96H35 190 aaKnown RBP4.11□□□□□ -1.75
VPS13A-211ENST00000484581 LYZL4Q96KX0 146 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 GUCD1Q96NT3 240 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 LRRC1Q9BTT6 524 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 NTMT1Q9BV86 223 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 CCSER1Q9C0I3 900 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 ECT2Q9H8V3 914 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 PANK4Q9NVE7 773 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 PTTG2Q9NZH5 202 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 PLA2G4CQ9UP65 541 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 NUDCQ9Y266 331 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 TMED7Q9Y3B3 224 aa4.11□□□□□ -1.75
VPS13A-211ENST00000484581 IGHV4OR15-8A0A075B7B6 117 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 IGLV5-45A0A087WSX0 123 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 H3BMM5 538 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 ANGPT2O15123 496 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 CLDN3O15551 220 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 DIRAS3O95661 229 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 KRT6BP04259 564 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 YES1P07947 543 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 SFTPBP07988 381 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 SERPINF2P08697 491 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 FGF5P12034 268 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 CYP3A5P20815 502 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 CA6P23280 308 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 EPHA2P29317 976 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 PKLRP30613 574 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 AKT2P31751 481 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 PRPHP41219 470 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 MAGEA4P43358 317 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 SLC6A12P48065 614 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 KRT6CP48668 564 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 PITPNBP48739 271 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 CLCN4P51793 760 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 CDH11P55287 796 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 SPP2Q13103 211 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 DMP1Q13316 513 aaPredicted RBP4.1□□□□□ -1.75
VPS13A-211ENST00000484581 MSLNQ13421 630 aaPredicted RBP4.1□□□□□ -1.75
VPS13A-211ENST00000484581 HERC3Q15034 1050 aa4.1□□□□□ -1.75
VPS13A-211ENST00000484581 GPR33Q49SQ1 333 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms