RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SOX8P57073 446 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 TSTA3Q13630 321 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-213ENST00000484112 CSHL1Q14406 222 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 ZNF169Q14929 603 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-213ENST00000484112 EFTUD2Q15029 972 aaKnown RBP eCLIP9.5□□□□□ -0.896e-6■■□□□ 12.5
CPSF4-213ENST00000484112 TSNQ15631 228 aaKnown RBP9.5□□□□□ -0.89
CPSF4-213ENST00000484112 MUM1Q2TAK8 710 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 TEX35Q5T0J7 233 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 MROH9Q5TGP6 573 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 NIPAL1Q6NVV3 410 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 LINC00696Q6ZRV3 163 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 SHISA6Q6ZSJ9 500 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 TTLL10Q6ZVT0 673 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 ISCA2Q86U28 154 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 GPSM1Q86YR5 675 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 FAM20CQ8IXL6 584 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 CATSPER1Q8NEC5 780 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 FKBP10Q96AY3 582 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 RHBDF1Q96CC6 855 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 MAGEB10Q96LZ2 347 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-213ENST00000484112 EGFL8Q99944 293 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 ATG10Q9H0Y0 220 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 SLC26A1Q9H2B4 701 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 RUBCNLQ9H714 662 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 PELI2Q9HAT8 420 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 SNX15Q9NRS6 342 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 NUDT4Q9NZJ9 180 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 COPG2Q9UBF2 871 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 TMCO1Q9UM00 188 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 CDC14AQ9UNH5 594 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 KLHL20Q9Y2M5 609 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 DYRK1BQ9Y463 629 aa9.5□□□□□ -0.89
CPSF4-213ENST00000484112 MDC1Q14676 2089 aaKnown RBP9.5□□□□□ -0.89
CPSF4-213ENST00000484112 PCM1Q15154 2024 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 A0A096LPK6 155 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 A0A0J9YVX5 310 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 A0A1B0GUH1 482 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 HYKKA2RU49 373 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 HMX2A2RU54 273 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 H0YGG7 62 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 H7BY64 318 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 ALDOAP04075 364 aaKnown RBP9.49□□□□□ -0.89
CPSF4-213ENST00000484112 C2P06681 752 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 SNRPB2P08579 225 aaKnown RBP9.49□□□□□ -0.89
CPSF4-213ENST00000484112 SNRPAP09012 282 aaKnown RBP9.49□□□□□ -0.89
CPSF4-213ENST00000484112 GNAZP19086 355 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 MMP11P24347 488 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 GRNP28799 593 aaKnown RBP9.49□□□□□ -0.89
CPSF4-213ENST00000484112 TSFMP43897 325 aaKnown RBP9.49□□□□□ -0.89
CPSF4-213ENST00000484112 SLC6A12P48065 614 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 RIPPLY3P57055 190 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 ARF3P61204 181 aaPredicted RBP9.49□□□□□ -0.89
CPSF4-213ENST00000484112 CSNK1G2P78368 415 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 FAM53BQ14153 422 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 RASA2Q15283 850 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 TLR1Q15399 786 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 UAP1Q16222 522 aaPredicted RBP9.49□□□□□ -0.89
CPSF4-213ENST00000484112 NDUFA9Q16795 377 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 TSNAXIP1Q2TAA8 658 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 PRTGQ2VWP7 1150 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 WASHC2DQ5SRD0 308 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 WDR93Q6P2C0 686 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 ADGRD1Q6QNK2 874 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 FAM180AQ6UWF9 173 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 MBOAT1Q6ZNC8 495 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 TIFABQ6ZNK6 161 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 ADCK2Q7Z695 626 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 CMC1Q7Z7K0 106 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 THOC6Q86W42 341 aaKnown RBP9.49□□□□□ -0.89
CPSF4-213ENST00000484112 CSNK1A1LQ8N752 337 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 CAMKVQ8NCB2 501 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 DCAKDQ8WVC6 231 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 SLC5A11Q8WWX8 675 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 THOC3Q96J01 351 aaKnown RBP9.49□□□□□ -0.89
CPSF4-213ENST00000484112 PRAP1Q96NZ9 151 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 EHD1Q9H4M9 534 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 SOX17Q9H6I2 414 aaPredicted RBP9.49□□□□□ -0.89
CPSF4-213ENST00000484112 EPS8L2Q9H6S3 715 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 WDR54Q9H977 334 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 SLC22A11Q9NSA0 550 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 IGSF5Q9NSI5 407 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 CUTCQ9NTM9 273 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 NXT1Q9UKK6 140 aaKnown RBP9.49□□□□□ -0.89
CPSF4-213ENST00000484112 ITGB1BP2Q9UKP3 347 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 IKZF3Q9UKT9 509 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 RNF112Q9ULX5 631 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 CCDC88CQ9P219 2028 aa9.49□□□□□ -0.89
CPSF4-213ENST00000484112 DOPEY1Q5JWR5 2465 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 IQANK1A0A1B0GTG1 560 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 TRBC2A0A5B9 178 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 SOCS6O14544 535 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 PCDH17O14917 1159 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 HAT1O14929 419 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 JRKO75564 520 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 SNRNP200O75643 2136 aaKnown RBP9.48□□□□□ -0.89
CPSF4-213ENST00000484112 STK16O75716 305 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 RBP1P09455 135 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 TFEBP19484 476 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 HPDP32754 393 aaPredicted RBP9.48□□□□□ -0.89
CPSF4-213ENST00000484112 AHRP35869 848 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms