RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PPANQ9NQ55 473 aaKnown RBP16.96■□□□□ 0.31
ATG4B-221ENST00000483778 ABI3Q9P2A4 366 aa16.96■□□□□ 0.31
ATG4B-221ENST00000483778 CHMP2BQ9UQN3 213 aa16.96■□□□□ 0.31
ATG4B-221ENST00000483778 VWA7Q9Y334 891 aa16.96■□□□□ 0.31
ATG4B-221ENST00000483778 PSAT1Q9Y617 370 aa16.96■□□□□ 0.31
ATG4B-221ENST00000483778 SLC22A7Q9Y694 548 aa16.96■□□□□ 0.31
ATG4B-221ENST00000483778 NCOA6Q14686 2063 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-221ENST00000483778 A0A1B0GUH1 482 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 ARHGAP10A1A4S6 786 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 TP73O15350 636 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 ZNHIT1O43257 154 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 CHST10O43529 356 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 TTC4O95801 387 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 SERPIND1P05546 499 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 CCR8P51685 355 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 PER3P56645 1201 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 BTG2P78543 158 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 TUBA3CQ13748 450 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 NSDHLQ15738 373 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 ZNF766Q5HY98 468 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 LRRC8EQ6NSJ5 796 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 TUBA3EQ6PEY2 450 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 PAPD4Q6PIY7 484 aaKnown RBP16.95■□□□□ 0.3
ATG4B-221ENST00000483778 SBSNQ6UWP8 590 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 PCGF5Q86SE9 256 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 SRRM1Q8IYB3 904 aaKnown RBP16.95■□□□□ 0.3
ATG4B-221ENST00000483778 MDS2Q8NDY4 140 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 SLCO2A1Q92959 643 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 FBXL8Q96CD0 374 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 TSNARE1Q96NA8 513 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 KLHL31Q9H511 634 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 KLHL1Q9NR64 748 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 TEX264Q9Y6I9 313 aa16.95■□□□□ 0.3
ATG4B-221ENST00000483778 CACNA1CQ13936 2221 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 GOLGA6L10A0A0M3HER8 536 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 USP27XA6NNY8 438 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 C4orf51C9J302 202 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 FAM227AF5H4B4 570 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 CDC7O00311 574 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 NDUFS4O43181 175 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 GALR3O60755 368 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-221ENST00000483778 B4GALT2O60909 372 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 HIST1H2AGP0C0S8 130 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-221ENST00000483778 ZNF888P0CJ79 500 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-221ENST00000483778 HIST1H2ADP20671 130 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 CCND1P24385 295 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 HNF4AP41235 474 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 ACTN3Q08043 901 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-221ENST00000483778 HYAL2Q12891 473 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 PDAP1Q13442 181 aaKnown RBP16.94■□□□□ 0.3
ATG4B-221ENST00000483778 INAQ16352 499 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 C18orf21Q32NC0 220 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-221ENST00000483778 DEFB134Q4QY38 66 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 ZNF468Q5VIY5 522 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-221ENST00000483778 STEAP4Q687X5 459 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 SPINK14Q6IE38 97 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 KIAA0408Q6ZU52 694 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 ANKMY2Q8IV38 441 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 KLHL7Q8IXQ5 586 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 KIF2BQ8N4N8 673 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 ANKRD53Q8N9V6 530 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 DNAJB8Q8NHS0 232 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 M1APQ8TC57 530 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 ITLN2Q8WWU7 325 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-221ENST00000483778 HIST1H2AHQ96KK5 128 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 ZNF354BQ96LW1 612 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 HIST1H2AJQ99878 128 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 TRIM51Q9BSJ1 452 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 HAUS8Q9BT25 410 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 H2AFJQ9BTM1 129 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 SARGQ9BW04 601 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 SEC14L3Q9UDX4 400 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 FBN2P35556 2912 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 DCHS2Q6V1P9 2916 aa16.94■□□□□ 0.3
ATG4B-221ENST00000483778 PDZD2O15018 2839 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 TRGV8A0A0C4DH27 118 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 TRBC2A0A5B9 178 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 CES2O00748 559 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 PIAS1O75925 651 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 AGTR2P50052 363 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 ZNF460Q14592 562 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 USP10Q14694 798 aaKnown RBP16.93■□□□□ 0.3
ATG4B-221ENST00000483778 GALNT7Q86SF2 657 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 TICAM1Q8IUC6 712 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 UTP15Q8TED0 518 aaKnown RBP16.93■□□□□ 0.3
ATG4B-221ENST00000483778 CAPZA3Q96KX2 299 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 NAT9Q9BTE0 207 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 UNKQ9C0B0 810 aaKnown RBP16.93■□□□□ 0.3
ATG4B-221ENST00000483778 TSPAN10Q9H1Z9 355 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-221ENST00000483778 MMP25Q9NPA2 562 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 COPG2Q9UBF2 871 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 C19orf25Q9UFG5 118 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-221ENST00000483778 SH3BGRL2Q9UJC5 107 aa16.93■□□□□ 0.3
ATG4B-221ENST00000483778 MAGEB17A8MXT2 336 aa16.92■□□□□ 0.3
ATG4B-221ENST00000483778 PRSS44E7EML9 344 aa16.92■□□□□ 0.3
ATG4B-221ENST00000483778 CCL21O00585 134 aa16.92■□□□□ 0.3
ATG4B-221ENST00000483778 CRYABP02511 175 aaKnown RBP16.92■□□□□ 0.3
ATG4B-221ENST00000483778 FHP07954 510 aa16.92■□□□□ 0.3
ATG4B-221ENST00000483778 CYC1P08574 325 aa16.92■□□□□ 0.3
ATG4B-221ENST00000483778 SLC35G6P0C7Q6 338 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms