RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 EME1Q96AY2 570 aa16.48■□□□□ 0.23
MRPL28-210ENST00000483764 SLC22A18Q96BI1 424 aa16.48■□□□□ 0.23
MRPL28-210ENST00000483764 ZBTB18Q99592 522 aa16.48■□□□□ 0.23
MRPL28-210ENST00000483764 EFCAB11Q9BUY7 163 aa16.48■□□□□ 0.23
MRPL28-210ENST00000483764 TWSG1Q9GZX9 223 aa16.48■□□□□ 0.23
MRPL28-210ENST00000483764 UCK1Q9HA47 277 aa16.48■□□□□ 0.23
MRPL28-210ENST00000483764 SLC52A3Q9NQ40 469 aa16.48■□□□□ 0.23
MRPL28-210ENST00000483764 CCM2LQ9NUG4 571 aaPredicted RBP16.48■□□□□ 0.23
MRPL28-210ENST00000483764 SNX6Q9UNH7 406 aa16.48■□□□□ 0.23
MRPL28-210ENST00000483764 BTRCQ9Y297 605 aa16.48■□□□□ 0.23
MRPL28-210ENST00000483764 ARHGEF17Q96PE2 2063 aaPredicted RBP16.48■□□□□ 0.23
MRPL28-210ENST00000483764 USP34Q70CQ2 3546 aa16.48■□□□□ 0.23
MRPL28-210ENST00000483764 CACNA1EQ15878 2313 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 SMIM31A0A1B0GVY4 71 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 PIPSLA2A3N6 862 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 OR6C74A6NCV1 312 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 ISM1B1AKI9 464 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 MANBAO00462 879 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 TNFAIP8O95379 198 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 CER1O95813 267 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 CAPN3P20807 821 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 PSMA4P25789 261 aaKnown RBP16.47■□□□□ 0.23
MRPL28-210ENST00000483764 PEBP1P30086 187 aaKnown RBP16.47■□□□□ 0.23
MRPL28-210ENST00000483764 ERFP50548 548 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 YBX1P67809 324 aaKnown RBP16.47■□□□□ 0.23
MRPL28-210ENST00000483764 NFYCQ13952 458 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 KIR2DS3Q14952 304 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 SF1Q15637 639 aaKnown RBP16.47■□□□□ 0.23
MRPL28-210ENST00000483764 LRRC36Q1X8D7 754 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 C6orf10Q5SRN2 563 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 SCIMPQ6UWF3 145 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 RETREG3Q86VR2 466 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 ZFAND4Q86XD8 727 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 ZNF761Q86XN6 746 aaPredicted RBP16.47■□□□□ 0.23
MRPL28-210ENST00000483764 GATAD2AQ86YP4 633 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 SLC15A3Q8IY34 581 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 TNIP2Q8NFZ5 429 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 OR9I1Q8NGQ6 314 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 PKP2Q99959 881 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.47■□□□□ 0.23
MRPL28-210ENST00000483764 ELOVL6Q9H5J4 265 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 EIF3LQ9Y262 564 aaKnown RBP16.47■□□□□ 0.23
MRPL28-210ENST00000483764 PCDHA9Q9Y5H5 950 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 PTGDR2Q9Y5Y4 395 aa16.47■□□□□ 0.23
MRPL28-210ENST00000483764 H0YIV9 168 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 POLR2CP19387 275 aaPredicted RBP16.46■□□□□ 0.23
MRPL28-210ENST00000483764 JAK1P23458 1154 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 SLC6A2P23975 617 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 HTR1EP28566 365 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 HTR6P50406 440 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 CCT8P50990 548 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 ABATP80404 500 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 LAPTM5Q13571 262 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 ABRAXAS2Q15018 415 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 FXNQ16595 210 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 VPS26BQ4G0F5 336 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 SGO1Q5FBB7 561 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 PAGE2BQ5JRK9 111 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 INTS11Q5TA45 600 aaKnown RBP16.46■□□□□ 0.23
MRPL28-210ENST00000483764 UGT2A3Q6UWM9 527 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 ERMP1Q7Z2K6 904 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 RNF148Q8N7C7 305 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 ARL10Q8N8L6 244 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 FNDC5Q8NAU1 212 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 ABHD11Q8NFV4 315 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 OR10G6Q8NH81 332 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 ZNF597Q96LX8 424 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 SLC38A3Q99624 504 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 PELI2Q9HAT8 420 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 HRASLS2Q9NWW9 162 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 NLGN3Q9NZ94 848 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 GMEB2Q9UKD1 530 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 ZNF490Q9ULM2 529 aaPredicted RBP16.46■□□□□ 0.23
MRPL28-210ENST00000483764 PCDHGA11Q9Y5H2 935 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 ENTPD2Q9Y5L3 495 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 SNX13Q9Y5W8 968 aa16.46■□□□□ 0.23
MRPL28-210ENST00000483764 H7BY64 318 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 FXYD1O00168 92 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 NME4O00746 187 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 TXNDC9O14530 226 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 KHNYNO15037 678 aaKnown RBP16.45■□□□□ 0.22
MRPL28-210ENST00000483764 CCNDBP1O95273 360 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 UBTFL6P0CB48 400 aaPredicted RBP16.45■□□□□ 0.22
MRPL28-210ENST00000483764 ALPPL2P10696 532 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 ACPPP15309 386 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 TCN1P20061 433 aaPredicted RBP16.45■□□□□ 0.22
MRPL28-210ENST00000483764 CMPK1P30085 196 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 CCR8P51685 355 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 SLBPQ14493 270 aaKnown RBP eCLIP16.45■□□□□ 0.22
MRPL28-210ENST00000483764 HIST2H2ACQ16777 129 aaPredicted RBP16.45■□□□□ 0.22
MRPL28-210ENST00000483764 IL23RQ5VWK5 629 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 FRG2Q64ET8 278 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 HIST2H2AA3Q6FI13 130 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 LAIR1Q6GTX8 287 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 TRIM46Q7Z4K8 759 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 FAM129CQ86XR2 697 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 LILRA2Q8N149 483 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 OR2L3Q8NG85 312 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 OR4K1Q8NGD4 311 aa16.45■□□□□ 0.22
MRPL28-210ENST00000483764 SELENOMQ8WWX9 145 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms