RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 SOCS2O14508 198 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 TNFRSF10CO14798 259 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 ACOX3O15254 700 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 PRICKLE3O43900 615 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-225ENST00000483495 LDLRP01130 860 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 FURINP09958 794 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 HOXB6P17509 224 aaKnown RBP12.69□□□□□ -0.38
CPNE1-225ENST00000483495 ENGP17813 658 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 LRIT3Q3SXY7 679 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 TMTC4Q5T4D3 741 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 KHDRBS2Q5VWX1 349 aaKnown RBP12.69□□□□□ -0.38
CPNE1-225ENST00000483495 ABRAXAS1Q6UWZ7 409 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 ZNF621Q6ZSS3 439 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 PGBD3Q8N328 593 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 OR52E1Q8NGJ3 308 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 OR2A1Q8NGT9 310 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 OR1E3Q8WZA6 343 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 RNF145Q96MT1 663 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 WDR92Q96MX6 357 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 SEPHS2Q99611 448 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 ZNF717Q9BY31 904 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-225ENST00000483495 PRM3Q9NNZ6 103 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 PRDM8Q9NQV8 689 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 ATAD3AQ9NVI7 634 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 USP36Q9P275 1121 aaKnown RBP12.69□□□□□ -0.38
CPNE1-225ENST00000483495 ICKQ9UPZ9 632 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 WBP11Q9Y2W2 641 aaKnown RBP12.69□□□□□ -0.38
CPNE1-225ENST00000483495 IGKV1-8A0A0C4DH67 115 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 ARHGAP10A1A4S6 786 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 SAC3D1A6NKF1 404 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 OR52A4PA6NMU1 304 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 PDZK1P1A8MUH7 402 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 H7BY64 318 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 NARSO43776 548 aaKnown RBP12.68□□□□□ -0.38
CPNE1-225ENST00000483495 RASAL1O95294 804 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 IGLV3-19P01714 112 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 KLK1P06870 262 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 PPIBP23284 216 aaKnown RBP12.68□□□□□ -0.38
CPNE1-225ENST00000483495 TPP2P29144 1249 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-225ENST00000483495 CHN2P52757 468 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 CSNK1G2P78368 415 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 CHRNB3Q05901 458 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 ZNF385BQ569K4 471 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 NHSL2Q5HYW2 709 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 C6orf52Q5T4I8 152 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 COL13A1Q5TAT6 717 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-225ENST00000483495 CPZQ66K79 652 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 CHRDL2Q6WN34 429 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 CBR4Q8N4T8 237 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 SNX19Q92543 992 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 FAM162AQ96A26 154 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 PDXPQ96GD0 296 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 PRAP1Q96NZ9 151 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 BDH2Q9BUT1 245 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 SPATA9Q9BWV2 254 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 PHF7Q9BWX1 381 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-225ENST00000483495 MAGIXQ9H6Y5 334 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 KIR3DX1Q9H7L2 352 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 SLC2A4RGQ9NR83 387 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 UBAP1Q9NZ09 502 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 SCHIP1Q9P0W5 487 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-225ENST00000483495 DLGAP2Q9P1A6 1054 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 PCOLCE2Q9UKZ9 415 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 OAZ3Q9UMX2 235 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-225ENST00000483495 AK5Q9Y6K8 562 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 CROCCQ5TZA2 2017 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 H0Y8X5 98 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 PLPP1O14494 284 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 CLOCKO15516 846 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 KCNK5O95279 499 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 CPSF4O95639 269 aaKnown RBP12.68□□□□□ -0.38
CPNE1-225ENST00000483495 GBAP04062 536 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 ASGR2P07307 311 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 ABCB1P08183 1280 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-225ENST00000483495 HTR1BP28222 390 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 TAS2R50P59544 299 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 YPEL5P62699 121 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 ABATP80404 500 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 TXNL4AP83876 142 aaKnown RBP12.68□□□□□ -0.38
CPNE1-225ENST00000483495 KRT33BQ14525 404 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 TPRG1LQ5T0D9 272 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 OR52E8Q6IFG1 317 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 ERICH5Q6P6B1 374 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 ENPP6Q6UWR7 440 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 ENPP7Q6UWV6 458 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 FKBP9P1Q75LS8 142 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 CHERPQ8IWX8 916 aaKnown RBP12.68□□□□□ -0.38
CPNE1-225ENST00000483495 FAM86B1Q8N7N1 296 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 NETO1Q8TDF5 533 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 ZFP90Q8TF47 636 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 CHST8Q9H2A9 424 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 XKR8Q9H6D3 395 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 TPT1P8Q9HAU6 139 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 SH3BP4Q9P0V3 963 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 PDP2Q9P2J9 529 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 ZNF282Q9UDV7 671 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-225ENST00000483495 TBC1D29Q9UFV1 150 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 EBF1Q9UH73 591 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 CORO2BQ9UQ03 480 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms