RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 EEF1DP29692 281 aaKnown RBP19.86■□□□□ 0.77
SEC13-217ENST00000482647 IL10RAQ13651 578 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 E2F2Q14209 437 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 SSPNQ14714 243 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 NKG7Q16617 165 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 TBR1Q16650 682 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 DEFB109BQ30KR1 87 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 FAM69BQ5VUD6 431 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 PRAMEF9Q5VWM5 478 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 BORAQ6PGQ7 559 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 SH2D5Q6ZV89 423 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 ABHD13Q7L211 337 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 OR9A4Q8NGU2 314 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 ZCCHC10Q8TBK6 192 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 CREB3L4Q8TEY5 395 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 YIPF2Q9BWQ6 316 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 CTSFQ9UBX1 484 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 ZNF490Q9ULM2 529 aaPredicted RBP19.86■□□□□ 0.77
SEC13-217ENST00000482647 POLHQ9Y253 713 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 ZFYVE26Q68DK2 2539 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 ANKDD1BA6NHY2 528 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 LRRC14BA6NHZ5 514 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 VSTM2BA6NLU5 285 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 ERVH48-1M5A8F1 160 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 CNOT3O75175 753 aaKnown RBP19.85■□□□□ 0.77
SEC13-217ENST00000482647 GLRA3O75311 464 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 FURINP09958 794 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 KRT4P19013 534 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 SKP1P63208 163 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 NIPAL1Q6NVV3 410 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 GOLGA7Q7Z5G4 137 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 RAB43Q86YS6 212 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.85■□□□□ 0.77
SEC13-217ENST00000482647 AFAP1L2Q8N4X5 818 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 MIEF2Q96C03 454 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 UBL7Q96S82 380 aaPredicted RBP19.85■□□□□ 0.77
SEC13-217ENST00000482647 SLC6A16Q9GZN6 736 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 IPPKQ9H8X2 491 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 ACTR8Q9H981 624 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 MKKSQ9NPJ1 570 aaPredicted RBP19.85■□□□□ 0.77
SEC13-217ENST00000482647 TRPC4Q9UBN4 977 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 PLAAQ9Y263 795 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 MAP4K5Q9Y4K4 846 aa19.85■□□□□ 0.77
SEC13-217ENST00000482647 ATMQ13315 3056 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 CLEC3AO75596 197 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 ALOX12P18054 663 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 IL1RNP18510 177 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 CD22P20273 847 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 HPDP32754 393 aaPredicted RBP19.84■□□□□ 0.77
SEC13-217ENST00000482647 CRHR1P34998 444 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 HNF4AP41235 474 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 CCR10P46092 362 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 STXBP1P61764 594 aaKnown RBP19.84■□□□□ 0.77
SEC13-217ENST00000482647 LIPJQ5W064 366 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 MED27Q6P2C8 311 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 AMER3Q8N944 861 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 STT3BQ8TCJ2 826 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 ADAMTS17Q8TE56 1095 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 CCT6BQ92526 530 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 TTC9Q92623 222 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 EXTL1Q92935 676 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 ARHGAP9Q9BRR9 750 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 TMEM109Q9BVC6 243 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 RHBGQ9H310 441 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 LGALS13Q9UHV8 139 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 GRID1Q9ULK0 1009 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 NAALAD2Q9Y3Q0 740 aa19.84■□□□□ 0.77
SEC13-217ENST00000482647 IGLV3-12A0A075B6K2 115 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 A8MT66 165 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 SGK494L7N484 410 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 COPEO14579 308 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 UGDHO60701 494 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 ERLIN1O75477 346 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 ZGLP1P0C6A0 271 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 SERPINB1P30740 379 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 OTX2P32243 289 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 SNRPNP63162 240 aaKnown RBP19.83■□□□□ 0.77
SEC13-217ENST00000482647 GRHL2Q6ISB3 625 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 PRSS41Q7RTY9 318 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 MYLK4Q86YV6 388 aaPredicted RBP19.83■□□□□ 0.77
SEC13-217ENST00000482647 APOBEC4Q8WW27 367 aaKnown RBP19.83■□□□□ 0.77
SEC13-217ENST00000482647 ATP6V1E2Q96A05 226 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 NACC2Q96BF6 587 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 WBP1Q96G27 269 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 IP6K3Q96PC2 410 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 SPSB2Q99619 263 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 TGIF2Q9GZN2 237 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 SOX17Q9H6I2 414 aaPredicted RBP19.83■□□□□ 0.77
SEC13-217ENST00000482647 NOL11Q9H8H0 719 aaKnown RBP19.83■□□□□ 0.77
SEC13-217ENST00000482647 PRM3Q9NNZ6 103 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 PCTPQ9UKL6 214 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 MAN2B2Q9Y2E5 1009 aa19.83■□□□□ 0.77
SEC13-217ENST00000482647 MDC1Q14676 2089 aaKnown RBP19.82■□□□□ 0.76
SEC13-217ENST00000482647 LRIT2A6NDA9 550 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 DLX3O60479 287 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 GALR3O60755 368 aaPredicted RBP19.82■□□□□ 0.76
SEC13-217ENST00000482647 KLHL18O94889 574 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 IGHEP01854 428 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 UMODP07911 640 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 ZNF888P0CJ79 500 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms