RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 PEX5P50542 639 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 PGGT1BP53609 377 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 EEF1A1P68104 462 aaKnown RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 TRAP1Q12931 704 aaKnown RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 MSLNQ13421 630 aaPredicted RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 SNTB2Q13425 540 aaKnown RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 CDH18Q13634 790 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 RBMS2Q15434 407 aaKnown RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 CCDC142Q17RM4 750 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 ASPRV1Q53RT3 343 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 TDRD12Q587J7 1177 aaKnown RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 ZNF542PQ5EBM4 170 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 C20orf194Q5TEA3 1177 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 EEF1A1P5Q5VTE0 462 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 UGT3A1Q6NUS8 523 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 RTN4RL2Q86UN3 420 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 DCP1BQ8IZD4 617 aaKnown RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 PRSS35Q8N3Z0 413 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 RBMXL3Q8N7X1 1067 aaKnown RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 BCORP1Q8N888 145 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 U2AF1L4Q8WU68 220 aaKnown RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 SCMH1Q96GD3 660 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 RBM41Q96IZ5 413 aaKnown RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 PCDHB18PQ96TA0 734 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 URM1Q9BTM9 101 aaKnown RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 LRRC2Q9BYS8 371 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 POLR1EQ9GZS1 481 aaKnown RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 TMEM117Q9H0C3 514 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 SLITRK6Q9H5Y7 841 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 GORASP2Q9H8Y8 452 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 ACTR8Q9H981 624 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 A4GALTQ9NPC4 353 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 FARSBQ9NSD9 589 aaKnown RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 ACOXLQ9NUZ1 547 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 SMARCAL1Q9NZC9 954 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 ZNF224Q9NZL3 707 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 ZDHHC2Q9UIJ5 367 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 STUB1Q9UNE7 303 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 DLGAP4Q9Y2H0 992 aa4.89□□□□□ -1.63
COPA-203ENST00000481040 MYH14Q7Z406 1995 aaKnown RBP4.89□□□□□ -1.63
COPA-203ENST00000481040 IGLV5-52A0A0A0MRZ9 124 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 ANKRD61A6NGH8 418 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 H3BMM5 538 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 EEF2KO00418 725 aaKnown RBP4.88□□□□□ -1.63
COPA-203ENST00000481040 TNFRSF13BO14836 293 aaPredicted RBP4.88□□□□□ -1.63
COPA-203ENST00000481040 ADAM12O43184 909 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 TLX2O43763 284 aaPredicted RBP4.88□□□□□ -1.63
COPA-203ENST00000481040 SLC28A2O43868 658 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 CYTIPO60759 359 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 KCNJ13O60928 360 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 VPS26AO75436 327 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 APOHP02749 345 aaPredicted RBP4.88□□□□□ -1.63
COPA-203ENST00000481040 PROS1P07225 676 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 ZCCHC18P0CG32 403 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 CD59P13987 128 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 PRF1P14222 555 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 HOXB2P14652 356 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 FBLP22087 321 aaKnown RBP4.88□□□□□ -1.63
COPA-203ENST00000481040 STIP1P31948 543 aaKnown RBP4.88□□□□□ -1.63
COPA-203ENST00000481040 MAGEA11P43364 429 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 TNFRSF4P43489 277 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 OR3A3P47888 321 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 KCNK10P57789 538 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 HSF2Q03933 536 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 IL24Q13007 206 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 USH1GQ495M9 461 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 LRRC23Q53EV4 343 aaPredicted RBP4.88□□□□□ -1.63
COPA-203ENST00000481040 BOLA3Q53S33 107 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 C9orf50Q5SZB4 431 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 SPATA46Q5T0L3 261 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 FAM171BQ6P995 826 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 C15orf52Q6ZUT6 534 aaKnown RBP4.88□□□□□ -1.63
COPA-203ENST00000481040 PIWIL4Q7Z3Z4 852 aaKnown RBP4.88□□□□□ -1.63
COPA-203ENST00000481040 TECPR1Q7Z6L1 1165 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 VASH2Q86V25 355 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 MISPQ8IVT2 679 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 ADHFE1Q8IWW8 467 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 CERS5Q8N5B7 392 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 LMNTD1Q8N9Z9 388 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 OR10T2Q8NGX3 314 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 GPR137Q96N19 417 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 TTC25Q96NG3 672 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 GPA33Q99795 319 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 RTP3Q9BQQ7 232 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 FICDQ9BVA6 458 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 DCLK3Q9C098 648 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 PELI2Q9HAT8 420 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 TRNAU1APQ9NX07 287 aaKnown RBP4.88□□□□□ -1.63
COPA-203ENST00000481040 ATXN10Q9UBB4 475 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 NARFQ9UHQ1 456 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 SLC12A6Q9UHW9 1150 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 ERVK-19Q9WJR5 959 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 MRPS2Q9Y399 296 aaKnown RBP4.88□□□□□ -1.63
COPA-203ENST00000481040 ASB3Q9Y575 518 aa4.88□□□□□ -1.63
COPA-203ENST00000481040 CCDC162PA2VCL2 907 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 CTAGE9A4FU28 777 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 C2orf81A6NN90 581 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 MAPK13O15264 365 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 PDE9AO76083 593 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 PIGNO95427 931 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms